Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1287P-201ENST00000362914 107 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 SNORA63-201ENST00000363450 132 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1127P-201ENST00000384580 107 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1060P-201ENST00000384664 107 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-510P-201ENST00000391239 108 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNA5SP38-201ENST00000410750 119 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 MTND3P8-201ENST00000412909 339 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RPL32P35-201ENST00000415214 394 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC009161.1-201ENST00000417306 376 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 GPM6BP2-201ENST00000432046 144 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC007677.1-201ENST00000445757 515 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 GPM6BP1-201ENST00000446387 144 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC007547.1-201ENST00000462177 490 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RN7SL504P-201ENST00000494496 287 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNA5SP217-201ENST00000515959 91 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-277P-201ENST00000516272 106 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 SCARNA15.1-201ENST00000516384 125 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 HPRT1P3-201ENST00000539521 576 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 MIR4474-201ENST00000579189 78 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 MIR3609-201ENST00000582661 80 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AL161798.1-201ENST00000604630 131 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC092807.2-201ENST00000609367 243 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 PART1_1.1-201ENST00000611761 217 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 uc_338.1-201ENST00000612113 180 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 DUSP12P1-201ENST00000612874 516 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AL133216.2-202ENST00000634512 349 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AL035425.3-201ENST00000564206 4996 ntBASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.26□□□□□ -1.89
NCKIPSDQ9NZQ3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-140P-201ENST00000384566 108 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 U3.26-201ENST00000391236 204 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 UBA52P6-201ENST00000399822 382 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AL592114.1-201ENST00000403842 483 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU4-26P-201ENST00000410270 107 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU4-46P-201ENST00000410818 138 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 CALM2P2-201ENST00000428512 440 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 SAR1AP4-201ENST00000429225 591 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 IFNA20P-201ENST00000436840 528 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-329P-201ENST00000459618 107 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC083904.1-201ENST00000487828 231 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC091885.1-201ENST00000506658 268 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU1-143P-201ENST00000516296 146 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-928P-201ENST00000516876 104 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 HSPE1P7-201ENST00000604681 321 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC022893.3-201ENST00000607665 437 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 U1.23-201ENST00000610293 146 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 uc_338.5-201ENST00000611839 155 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU1-68P-201ENST00000615382 146 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AL359547.2-201ENST00000615810 418 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 uc_338.11-201ENST00000619132 160 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 U1.39-201ENST00000621562 146 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 AC073308.1-201ENST00000623696 305 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 TPTEP1-208ENST00000636884 213 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 HSPA8P4-201ENST00000511877 1920 ntBASIC3.25□□□□□ -1.89
NCKIPSDQ9NZQ3 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC008264.2-201ENST00000610193 3731 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1227P-201ENST00000383981 107 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-692P-201ENST00000384496 107 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 MIR591-201ENST00000385290 95 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-387P-201ENST00000411331 105 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC092047.1-201ENST00000424997 240 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RPS15AP27-201ENST00000449183 343 ntBASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.24□□□□□ -1.89
NCKIPSDQ9NZQ3 RNU6-1153P-201ENST00000516760 105 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms