Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 MAPK10-322ENST00000641485 4530 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 MIR208A-201ENST00000362287 71 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 RNU2-41P-201ENST00000410991 178 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 Z85995.1-201ENST00000415547 335 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AL645937.1-202ENST00000421799 937 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AL160275.3-201ENST00000423876 471 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 MTND3P23-201ENST00000431980 347 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 MRPL50P4-201ENST00000446432 475 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC007547.1-201ENST00000462177 490 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC003982.1-202ENST00000469928 248 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 RPL21P93-201ENST00000480465 489 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 RN7SL297P-201ENST00000483161 293 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC091885.1-201ENST00000506658 268 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC009901.1-201ENST00000506703 541 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA31.1-201ENST00000515993 133 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA31.5-201ENST00000516190 133 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-914P-201ENST00000516749 109 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 FGF7P1-201ENST00000582820 288 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC098826.3-201ENST00000603823 466 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 CTHRC1P1-201ENST00000605383 469 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AL627309.6-201ENST00000606857 840 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 AC093913.1-201ENST00000614178 329 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.02□□□□□ -1.93
SMARCAL1Q9NZC9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 RNA5SP374-201ENST00000362939 125 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 SNORD81.2-201ENST00000365153 76 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA4.3-201ENST00000365564 137 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 SNORD70.1-201ENST00000391007 85 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AL592114.1-201ENST00000403842 483 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 SNORD88.1-201ENST00000408684 91 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC009161.1-201ENST00000417306 376 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 NDUFB4P7-201ENST00000423198 363 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC007919.1-201ENST00000429380 217 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AL592045.1-201ENST00000429867 352 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 PRPS1P1-201ENST00000445305 876 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC092001.1-201ENST00000453012 261 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 MTND1P11-201ENST00000456661 876 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 RNU4-49P-201ENST00000516080 140 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 RNU7-30P-201ENST00000516835 62 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 PSMA3P-201ENST00000555485 635 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AL117336.2-201ENST00000602435 335 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC013553.2-201ENST00000604244 589 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC009570.1-201ENST00000609599 745 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AP003400.5-201ENST00000624827 617 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 MIR3651-201ENST00000630427 90 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 AC099654.5-201ENST00000636479 350 ntBASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SMARCAL1Q9NZC9 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-1167P-201ENST00000363227 94 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 Y_RNA.142-201ENST00000363491 102 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA14A-201ENST00000364773 135 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-715P-201ENST00000365204 103 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 MIR493-201ENST00000385254 89 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 SNORA16.2-201ENST00000390991 127 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 IFNA20P-201ENST00000436840 528 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC093019.1-201ENST00000443135 252 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 RNU6-1208P-201ENST00000459588 107 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC087588.1-201ENST00000462203 316 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 SUMO2P6-201ENST00000505273 288 ntBASIC3□□□□□ -1.93
SMARCAL1Q9NZC9 AC009812.2-201ENST00000517657 457 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms