Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 Z98749.2-208ENST00000381646 500 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MIR27B-201ENST00000385129 97 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 UBE2V1P2-201ENST00000397758 440 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AL663109.1-201ENST00000411498 844 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 BX682237.1-201ENST00000415016 335 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MORF4L1P6-201ENST00000418771 268 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AL160275.3-201ENST00000423876 471 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MTATP6P16-201ENST00000434543 526 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AL078601.1-201ENST00000444542 271 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MTCO2P7-201ENST00000446518 666 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 RPS3P1-201ENST00000456781 192 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MTND2P33-201ENST00000506452 1031 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 RN7SKP24-201ENST00000515888 284 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 RNU6-405P-201ENST00000516637 110 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MTCO2P4-201ENST00000517968 247 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC098848.2-201ENST00000588023 330 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC005332.10-201ENST00000612725 619 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 MIR6817-201ENST00000615588 66 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC025034.2-201ENST00000623264 286 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 AC010329.5-201ENST00000623497 2174 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.21□□□□□ -1.9
SMC4Q9NTJ3 Y_RNA.41-201ENST00000362646 102 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU6-181P-201ENST00000363225 107 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU6-74P-201ENST00000384235 107 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 SNORD116-4-201ENST00000384733 96 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 MIR627-201ENST00000384979 97 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AL162578.1-201ENST00000406202 378 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 OR51A5P-201ENST00000415429 942 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 CALM2P2-201ENST00000428512 440 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU4-29P-201ENST00000515943 174 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU6-123P-201ENST00000516163 102 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 SNORD27.1-201ENST00000516319 72 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU6-445P-201ENST00000516949 107 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 RNU6-685P-201ENST00000517088 95 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC008521.1-201ENST00000587471 187 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC091805.2-201ENST00000603848 235 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC024940.5-201ENST00000622889 474 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AC093648.1-201ENST00000623546 606 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 AL157786.1-207ENST00000627771 695 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 FO624990.1-201ENST00000636373 85 ntBASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.2□□□□□ -1.9
SMC4Q9NTJ3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC004944.1-201ENST00000517807 3059 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 RNU6-166P-201ENST00000384371 107 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 MIR518C-201ENST00000384822 101 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 MIR1-2-201ENST00000384961 85 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC010975.2-201ENST00000427781 588 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 MTCO2P11-201ENST00000431069 680 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 RPS15AP7-201ENST00000439294 405 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AL161651.1-201ENST00000440882 223 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 C1DP4-201ENST00000455429 424 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC022364.2-201ENST00000457963 554 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 RN7SKP298-201ENST00000515950 94 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 RNA5SP148-201ENST00000516527 94 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AP003392.2-201ENST00000527269 208 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 LINC00933-203ENST00000559812 219 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC234778.2-201ENST00000566241 354 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 AC091152.3-201ENST00000604227 325 ntBASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SMC4Q9NTJ3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 RNA5SP456-201ENST00000364002 114 ntBASIC3.18□□□□□ -1.9
SMC4Q9NTJ3 RNU6-1083P-201ENST00000384022 107 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms