Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC112771.1-201ENST00000463581 102 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC140059.1-201ENST00000489238 361 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RNU6-572P-201ENST00000516724 80 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 ACA59.2-201ENST00000517061 156 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 EEF1A1P37-201ENST00000522748 715 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 MTATP6P15-201ENST00000527233 835 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 RANP3-201ENST00000530970 276 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 LINC00933-203ENST00000559812 219 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AL356432.3-201ENST00000568952 465 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 AC021755.4-201ENST00000616620 456 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TREX1Q9NSU2 MIR5739-201ENST00000619803 80 ntBASIC1.76□□□□□ -2.13
TREX1Q9NSU2 U8.13-201ENST00000390842 128 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 FCF1P10-201ENST00000407590 479 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 RPL23AP39-201ENST00000415533 405 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 MTCO2P21-201ENST00000419780 677 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AL451074.3-201ENST00000437709 472 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AL009048.1-201ENST00000450437 298 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 CYP2C59P-201ENST00000457790 269 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 MTND1P3-201ENST00000484956 952 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 UBE2V1P12-201ENST00000503954 474 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC091951.3-201ENST00000504093 246 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC105185.1-201ENST00000518705 535 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 DUXAP1-201ENST00000556632 463 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 MIR3618-201ENST00000580330 88 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 MTCO2P2-201ENST00000591258 225 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AL358072.1-201ENST00000604156 575 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AC104763.2-201ENST00000604179 382 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.75□□□□□ -2.13
TREX1Q9NSU2 AL607023.1-201ENST00000620045 248 ntBASIC1.75□□□□□ -2.13
TREX1Q9NSU2 Z98749.2-208ENST00000381646 500 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 RNU6-157P-201ENST00000383957 107 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL354692.1-201ENST00000423044 315 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL645568.3-201ENST00000433683 316 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC084290.1-201ENST00000434995 374 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC010095.1-201ENST00000443543 144 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 BTF3P15-201ENST00000455606 336 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 snoU109.1-201ENST00000459339 135 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC023194.1-201ENST00000493084 308 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 RNA5SP137-201ENST00000516833 135 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 RPS3AP4-201ENST00000555161 764 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC104581.2-201ENST00000572227 430 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 MIR3146-201ENST00000580367 79 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL158827.2-201ENST00000602494 330 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AP001981.2-201ENST00000603241 418 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.6-201ENST00000603753 252 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.11-201ENST00000604059 253 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC008162.1-201ENST00000604718 254 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.1-201ENST00000604752 252 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.5-201ENST00000605253 252 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.12-201ENST00000605291 253 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.8-201ENST00000605353 252 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL670379.7-201ENST00000605823 252 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL139418.1-201ENST00000613613 177 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AC009233.1-201ENST00000616477 371 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 MIR6134-201ENST00000617606 109 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 AL691447.3-201ENST00000635020 330 ntBASIC1.74□□□□□ -2.13
TREX1Q9NSU2 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.74□□□□□ -2.13
TREX1Q9NSU2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 MIR301A-201ENST00000385261 86 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 RNU6-817P-201ENST00000391083 104 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 RNU2-62P-201ENST00000410868 191 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 SNORD56-201ENST00000413522 71 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL158823.1-201ENST00000418441 478 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL353706.1-201ENST00000436728 494 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 HMGB3P12-201ENST00000438745 556 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 FDX1P2-201ENST00000450769 375 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.73□□□□□ -2.13
TREX1Q9NSU2 AC093899.1-201ENST00000457984 376 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 RPL21P99-201ENST00000480369 423 ntBASIC1.73□□□□□ -2.13
TREX1Q9NSU2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms