Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 MTND1P27-201ENST00000451117 902 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 EEF1B2P7-201ENST00000451177 676 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC091965.2-201ENST00000512324 613 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 MTCO3P28-201ENST00000513351 515 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 Y_RNA.695-201ENST00000516715 107 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 RNU6-685P-201ENST00000517088 95 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC105137.2-201ENST00000569073 466 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC025811.1-201ENST00000604312 472 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC087045.1-201ENST00000605856 382 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC093648.1-201ENST00000623546 606 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 AC016717.2-201ENST00000609089 5141 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 MTND5P17-201ENST00000418405 1603 ntBASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.91□□□□□ -2.1
CCL28Q9NRJ3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
CCL28Q9NRJ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
CCL28Q9NRJ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.1
CCL28Q9NRJ3 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RNU6-486P-201ENST00000363116 107 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 SNORD14B-201ENST00000364533 90 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RNU6-1072P-201ENST00000384703 107 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RNY3P9-201ENST00000384727 106 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RNU6-443P-201ENST00000384780 107 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MIR578-201ENST00000384828 96 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MIR218-1-201ENST00000384999 110 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC016831.2-201ENST00000417179 352 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 Z98742.2-201ENST00000431564 187 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 MTND2P4-201ENST00000445034 1004 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC080013.2-201ENST00000460866 323 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC107222.1-201ENST00000510899 637 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC008716.1-201ENST00000511084 513 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP112-201ENST00000515937 99 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC010186.2-204ENST00000537668 439 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC023824.2-201ENST00000566185 400 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC105245.1-201ENST00000581934 244 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC040904.1-201ENST00000590850 223 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AL138889.2-201ENST00000603883 242 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC007621.1-201ENST00000604544 437 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC109347.2-201ENST00000610220 349 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AL449363.1-201ENST00000617815 186 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AC138627.2-201ENST00000624202 601 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 AL359740.1-201ENST00000624340 592 ntBASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.9□□□□□ -2.11
CCL28Q9NRJ3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP68-201ENST00000363885 119 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RNU6-74P-201ENST00000384235 107 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 FTH1P15-201ENST00000406984 280 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP111-201ENST00000411386 101 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 BX276092.3-201ENST00000424182 230 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 CALM2P2-201ENST00000428512 440 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC133104.1-201ENST00000429100 218 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 MTCO3P5-201ENST00000433620 714 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RPS15AP9-201ENST00000439856 381 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RPS3AP12-201ENST00000443616 753 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC104058.1-201ENST00000448028 297 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RNU7-26P-201ENST00000458980 63 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC104435.1-201ENST00000483483 166 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RPL22P13-201ENST00000493291 347 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AIG1P1-201ENST00000503376 148 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 SNORD27.1-201ENST00000516319 72 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 RNA5SP148-201ENST00000516527 94 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 AC092325.1-201ENST00000566449 554 ntBASIC1.89□□□□□ -2.11
CCL28Q9NRJ3 MIR4319-201ENST00000577285 85 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms