Protein–RNA interactions for Protein: Q9NPD3

EXOSC4, Exosome complex component RRP41, humanhuman

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4Q9NPD3 HMGB3P12-201ENST00000438745 556 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC112204.1-201ENST00000502591 103 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-572P-201ENST00000516724 80 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-1092P-201ENST00000516955 87 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 EEF1A1P37-201ENST00000522748 715 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 OR5AQ1P-201ENST00000527596 927 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC084851.1-201ENST00000529105 249 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC118273.2-201ENST00000532092 465 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 CYCSP26-201ENST00000534107 320 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 ZNF321P-202ENST00000550843 495 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AL365204.3-201ENST00000612448 685 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC010378.1-201ENST00000619270 362 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AP003400.5-201ENST00000624827 617 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 AC006927.3-201ENST00000638789 384 ntBASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
EXOSC4Q9NPD3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AL359854.1-201ENST00000614203 1594 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU1-72P-201ENST00000362976 153 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU5F-7P-201ENST00000363696 115 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-898P-201ENST00000365627 104 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 Y_RNA.534-201ENST00000384599 112 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-19P-201ENST00000384718 107 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-817P-201ENST00000391083 104 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AL133475.1-201ENST00000404414 305 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RN7SKP158-201ENST00000410453 326 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AL030996.1-201ENST00000411430 235 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU7-125P-201ENST00000458760 62 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-953P-201ENST00000459154 107 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 FAM92A1P2-202ENST00000504766 877 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-914P-201ENST00000516749 109 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 RNA5SP337-201ENST00000517007 109 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AC009094.1-201ENST00000564443 426 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AC025678.1-201ENST00000567861 338 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AL138963.2-201ENST00000605137 226 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 AC068276.1-201ENST00000605793 379 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 uc_338.14-201ENST00000613162 166 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.74□□□□□ -2.13
EXOSC4Q9NPD3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-486P-201ENST00000363116 107 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 Y_RNA.560-201ENST00000384689 102 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR147B-201ENST00000390185 80 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 SNORD115.1-201ENST00000391109 76 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AL139156.1-201ENST00000412785 841 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC114491.1-201ENST00000416095 246 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AL139413.1-201ENST00000421309 217 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 BRK1P2-201ENST00000442875 223 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC011005.2-201ENST00000487324 359 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC010587.1-201ENST00000505809 469 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC116655.1-201ENST00000508324 901 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC117522.2-201ENST00000510049 657 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 SMURF2P1-201ENST00000514992 481 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 RNU2-10P-201ENST00000516375 211 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 SNORA31.19-201ENST00000517079 126 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AP003122.4-201ENST00000530980 758 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 OR5B19P-201ENST00000531766 928 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AL512310.1-201ENST00000548639 172 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR4782-201ENST00000577987 79 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR4435-1-201ENST00000582552 80 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR4760-201ENST00000585040 80 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AF131215.7-201ENST00000602443 707 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC025165.5-201ENST00000602802 578 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC093424.1-201ENST00000604999 338 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 MIR15A-201ENST00000607334 83 ntBASIC1.73□□□□□ -2.13
EXOSC4Q9NPD3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms