Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 NDUFB4P9-201ENST00000511646 388 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 SCARNA13-201ENST00000516672 275 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 MIR5680-201ENST00000577577 84 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 MIR4782-201ENST00000577987 79 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 MIR4276-201ENST00000584832 70 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VTA1Q9NP79 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 OR1M4P-201ENST00000589199 287 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 U2.21-201ENST00000637295 81 ntBASIC3.88□□□□□ -1.79
VTA1Q9NP79 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.88□□□□□ -1.79
VTA1Q9NP79 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 Y_RNA.315-201ENST00000365117 102 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 SNORA75B-201ENST00000384053 137 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 SNORA48.2-201ENST00000390926 124 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AL391417.1-201ENST00000404100 426 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AP000567.1-201ENST00000406413 156 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 FABP5P14-201ENST00000437273 393 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC006026.2-201ENST00000457376 180 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC092798.1-201ENST00000458542 409 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 HMGN1P13-201ENST00000505795 138 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 PHBP14-201ENST00000512887 367 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 RNU1-86P-201ENST00000516108 154 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 RN7SKP83-201ENST00000516512 178 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 RNU1-107P-201ENST00000516617 154 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 RNU6-572P-201ENST00000516724 80 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC109479.2-201ENST00000517842 174 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 COPS8P3-201ENST00000526024 482 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 IMMP1LP2-201ENST00000552954 492 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 APOOP1-201ENST00000604695 592 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
VTA1Q9NP79 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.87□□□□□ -1.79
VTA1Q9NP79 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VTA1Q9NP79 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 Y_RNA.813-201ENST00000364639 102 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RNU6-1303P-201ENST00000364841 107 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RNU6-166P-201ENST00000384371 107 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 Y_RNA.482-201ENST00000384377 111 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 HMGN2P8-201ENST00000391458 268 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AL592148.1-201ENST00000413568 445 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 MTCO2P27-201ENST00000420740 428 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC007560.1-201ENST00000426912 237 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC233279.1-201ENST00000455300 423 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 SNRPGP3-201ENST00000469405 227 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC128713.1-201ENST00000471495 306 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RPL30P14-201ENST00000482744 348 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RPS27P27-201ENST00000498779 255 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC096745.1-201ENST00000509945 370 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RNU6-1332P-201ENST00000516666 104 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 POLR3GP2-201ENST00000588366 668 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.86□□□□□ -1.79
VTA1Q9NP79 NUTF2P8-201ENST00000604593 363 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 RNU6-85P-201ENST00000605989 107 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 SCARNA4-202ENST00000625402 129 ntBASIC3.86□□□□□ -1.79
VTA1Q9NP79 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VTA1Q9NP79 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
VTA1Q9NP79 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
VTA1Q9NP79 RNU6-1297P-201ENST00000384415 104 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 MIR128-1-201ENST00000384921 82 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 MIR634-201ENST00000385208 97 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 MIR548F5-201ENST00000408421 86 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AL583843.1-201ENST00000456070 346 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC139453.3-201ENST00000493276 369 ntBASIC3.85□□□□□ -1.79
VTA1Q9NP79 AC110794.1-201ENST00000505816 425 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms