Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 SDR42E1P2-201ENST00000614861 481 ntBASIC3.01□□□□□ -1.93
UPF2Q9HAU5 AC010133.1-201ENST00000615809 842 ntBASIC3.01□□□□□ -1.93
UPF2Q9HAU5 AC090132.2-201ENST00000615881 347 ntBASIC3.01□□□□□ -1.93
UPF2Q9HAU5 AC024940.5-201ENST00000622889 474 ntBASIC3.01□□□□□ -1.93
UPF2Q9HAU5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.01□□□□□ -1.93
UPF2Q9HAU5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3□□□□□ -1.93
UPF2Q9HAU5 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 RNA5SP393-201ENST00000363423 117 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 RNU4-20P-201ENST00000365601 151 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 CD24P4-201ENST00000382840 243 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 RNU1-138P-201ENST00000384093 164 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 SNORA44-201ENST00000384584 132 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 MIR128-1-201ENST00000384921 82 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 FGF7P8-201ENST00000402994 292 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 ZNF90P2-204ENST00000419323 1075 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AL451054.2-201ENST00000420896 202 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 USP12PX-201ENST00000432383 1057 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3□□□□□ -1.93
UPF2Q9HAU5 RNU7-63P-201ENST00000459054 62 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 GMFBP1-201ENST00000467831 427 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AP000852.1-201ENST00000472460 573 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AC074344.1-201ENST00000512823 224 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3□□□□□ -1.93
UPF2Q9HAU5 RNU6-358P-201ENST00000516564 75 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 HMGN1P28-201ENST00000521340 364 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3□□□□□ -1.93
UPF2Q9HAU5 RPL23AP78-201ENST00000599928 470 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AL162413.1-201ENST00000603198 110 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AL354950.2-201ENST00000617939 290 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AL589994.2-201ENST00000621124 579 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AP003122.6-201ENST00000623831 495 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AC099654.14-201ENST00000638599 341 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 CKAP2P1-201ENST00000555477 2049 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3□□□□□ -1.93
UPF2Q9HAU5 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
UPF2Q9HAU5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
UPF2Q9HAU5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3□□□□□ -1.93
UPF2Q9HAU5 OR4G2P-202ENST00000641004 1759 ntBASIC3□□□□□ -1.93
UPF2Q9HAU5 AC073343.1-201ENST00000328239 651 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNU5A-1-201ENST00000362698 116 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 Y_RNA.255-201ENST00000364581 97 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 SNORD115-7-201ENST00000365306 82 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNU6-996P-201ENST00000365438 107 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNU6-1029P-201ENST00000384109 107 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 Y_RNA.481-201ENST00000384373 102 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 Y_RNA.576-201ENST00000384781 102 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MIR514A1-201ENST00000385133 98 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNA5SP252-201ENST00000391131 119 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNU6-1197P-201ENST00000391183 107 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 FO393413.1-201ENST00000402892 195 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RN7SKP140-201ENST00000411196 284 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 OR9R1P-201ENST00000412200 877 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RAC1P6-201ENST00000423911 575 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC092573.2-201ENST00000434546 243 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 DDX3P2-201ENST00000446138 111 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MTND1P18-201ENST00000448191 573 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC022364.2-201ENST00000457963 554 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RN7SL432P-201ENST00000484057 298 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RBBP4P6-201ENST00000508098 202 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC117522.1-201ENST00000509821 380 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC006445.2-201ENST00000510061 472 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNU6-390P-201ENST00000516259 103 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 SNORA31.11-201ENST00000516528 139 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RNA5SP367-201ENST00000516557 118 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 RN7SKP258-201ENST00000517151 304 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 OR5AL2P-201ENST00000532185 920 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC093012.1-202ENST00000549403 582 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MIR5583-1-201ENST00000580941 59 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC008521.1-201ENST00000587471 187 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC005000.2-201ENST00000605468 310 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 AC025034.2-201ENST00000623264 286 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MIR3662-201ENST00000637030 95 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 MTND5P17-201ENST00000418405 1603 ntBASIC2.99□□□□□ -1.93
UPF2Q9HAU5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
UPF2Q9HAU5 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
UPF2Q9HAU5 MIRLET7G-201ENST00000362280 84 ntBASIC2.98□□□□□ -1.93
UPF2Q9HAU5 RNU6-859P-201ENST00000362728 107 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms