Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SNORA31.3-201ENST00000516029 96 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 RNU6-1183P-201ENST00000517054 60 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.25□□□□□ -2.21
VCX3BQ9H321 MTND4LP25-201ENST00000570218 163 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC068620.3-201ENST00000602749 560 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 ELOCP5-201ENST00000604924 333 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC006270.3-201ENST00000605967 1036 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AL050343.2-201ENST00000607338 280 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC245297.2-201ENST00000610119 565 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 RNU6-1192P-201ENST00000612197 107 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 RNU6-489P-201ENST00000618289 107 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AP000676.3-201ENST00000623299 569 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 AC017037.3-201ENST00000625016 472 ntBASIC1.25□□□□□ -2.21
VCX3BQ9H321 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VCX3BQ9H321 RNU6-560P-201ENST00000364007 108 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 Y_RNA.311-201ENST00000365068 96 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCX3BQ9H321 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 RNA5SP501-201ENST00000410990 112 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 Z98742.3-201ENST00000418637 326 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC104651.1-201ENST00000427559 735 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 AL353706.1-201ENST00000436728 494 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 FAM103A2P-201ENST00000444122 354 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC245517.4-201ENST00000448601 281 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC245102.2-201ENST00000448956 180 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 RNU7-59P-201ENST00000459101 61 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 SUMO2P5-201ENST00000506790 245 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC021146.8-201ENST00000507455 733 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 RNU6-581P-201ENST00000516214 105 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 BNIP3P26-201ENST00000600827 554 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AL713866.2-201ENST00000603579 219 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC010900.2-201ENST00000604508 210 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 AL133445.2-201ENST00000611191 527 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 MIR8081-201ENST00000611533 95 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AL121895.2-201ENST00000619558 447 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 AC112204.3-201ENST00000623822 332 ntBASIC1.24□□□□□ -2.21
VCX3BQ9H321 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCX3BQ9H321 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
VCX3BQ9H321 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
VCX3BQ9H321 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
VCX3BQ9H321 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
VCX3BQ9H321 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 RNU1-23P-201ENST00000363361 144 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 RNU6-188P-201ENST00000364207 107 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 MIR1285-1-201ENST00000408593 84 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 OR51A5P-201ENST00000415429 942 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AL353621.1-201ENST00000418219 243 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AL358453.1-201ENST00000422522 250 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 MTCO1P27-201ENST00000448269 226 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 snoU13.9-201ENST00000458927 103 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 OR2A41P-201ENST00000473586 105 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC011005.2-201ENST00000487324 359 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 RNU6-902P-201ENST00000517212 91 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 AP003034.1-201ENST00000534621 422 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC079598.5-201ENST00000547460 117 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 MIR4293-201ENST00000584305 78 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 CYP2C61P-201ENST00000604072 290 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC131235.4-201ENST00000609288 620 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC013470.4-201ENST00000619978 986 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.23□□□□□ -2.21
VCX3BQ9H321 AC099654.9-201ENST00000637055 678 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
VCX3BQ9H321 MTND5P33-201ENST00000571250 1450 ntBASIC1.23□□□□□ -2.21
VCX3BQ9H321 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VCX3BQ9H321 Y_RNA.472-201ENST00000384322 102 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 RNU6-253P-201ENST00000384730 105 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 RNU6-298P-201ENST00000390888 96 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 MTCO1P17-201ENST00000411522 491 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC069282.1-201ENST00000411911 526 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 RPL37P10-201ENST00000412884 288 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AL121594.1-201ENST00000475906 575 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.22□□□□□ -2.21
VCX3BQ9H321 AC079395.1-201ENST00000510981 262 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 ACA59.2-201ENST00000517061 156 ntBASIC1.22□□□□□ -2.21
VCX3BQ9H321 RNU6-64P-201ENST00000517119 105 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms