Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 SNORA31.1-201ENST00000515993 133 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 SNORA31.5-201ENST00000516190 133 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 RNU6-307P-201ENST00000516743 106 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 RNU6-612P-201ENST00000516909 102 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AP005902.1-201ENST00000521358 186 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AC006199.1-201ENST00000548728 219 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 SNRPGP18-201ENST00000553000 214 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 PLCE1P1-201ENST00000622094 305 ntBASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM55Q9BYV6 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 MIR423-201ENST00000362201 94 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.216-201ENST00000364205 93 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RNA5SP283-201ENST00000365604 119 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 FTH1P15-201ENST00000406984 280 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RNU6-628P-201ENST00000410675 107 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RHEBP3-201ENST00000411920 351 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AL137792.2-201ENST00000443484 235 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RNU7-23P-201ENST00000459465 62 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC090096.1-201ENST00000489168 390 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RPL23AP49-201ENST00000492925 468 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC116655.1-201ENST00000508324 901 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 RNU6-976P-201ENST00000516086 111 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 Y_RNA.711-201ENST00000516993 102 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC010186.2-204ENST00000537668 439 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 MIR4429-201ENST00000580105 73 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC005899.2-201ENST00000584353 90 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 BNIP3P22-201ENST00000593399 556 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 AC140479.6-201ENST00000633535 357 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 MIR3199-2-201ENST00000636243 86 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 IPO8P1-201ENST00000455509 3109 ntBASIC4.09□□□□□ -1.75
TRIM55Q9BYV6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TRIM55Q9BYV6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.09□□□□□ -1.76
TRIM55Q9BYV6 UBE3AP2-201ENST00000429033 2259 ntBASIC4.09□□□□□ -1.76
TRIM55Q9BYV6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 RNU6-527P-201ENST00000363425 104 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 SNORD116-20-201ENST00000384529 92 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 SNORA11F-201ENST00000408237 128 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC243428.1-201ENST00000421099 264 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 BX276092.3-201ENST00000424182 230 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 MTND3P9-201ENST00000429526 346 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 MRPL42P6-201ENST00000486397 371 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC096576.1-201ENST00000489014 359 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 BTF3L4P4-201ENST00000506381 449 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 SMURF2P1-201ENST00000514992 481 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 RNU6-470P-201ENST00000515954 104 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC022634.1-201ENST00000520765 532 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 MTCO3P13-201ENST00000577757 781 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC006130.2-201ENST00000586202 326 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 MIR8076-201ENST00000611401 83 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC097372.5-201ENST00000623665 376 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AL732372.2-225ENST00000642124 456 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 AC007256.1-201ENST00000392253 2765 ntBASIC4.08□□□□□ -1.76
TRIM55Q9BYV6 MTND5P30-201ENST00000452896 1731 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.31-201ENST00000362574 102 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 Y_RNA.112-201ENST00000363250 102 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RNU6-308P-201ENST00000390957 107 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC023141.4-201ENST00000412031 328 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RPL23AP50-201ENST00000434149 455 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RPS15AP5-201ENST00000436276 388 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RPS29P27-201ENST00000463711 170 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AP002884.2-201ENST00000471647 395 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 FO393415.2-201ENST00000480085 343 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC114801.2-201ENST00000503825 781 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 AC008958.1-201ENST00000511047 682 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 RNU6-120P-201ENST00000516077 103 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 SNORA31.18-201ENST00000517043 134 ntBASIC4.07□□□□□ -1.76
TRIM55Q9BYV6 TVP23BP1-201ENST00000557500 617 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms