Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.78□□□□□ -2.28
ABCA3Q99758 RPS15AP5-201ENST00000436276 388 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 DDX3P2-201ENST00000446138 111 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 KATNBL1P6-201ENST00000453433 915 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 SUMO1P1-201ENST00000497904 306 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 AC025459.1-201ENST00000504072 156 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 SNORD19.2-201ENST00000516978 73 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 SNORA31.22-201ENST00000517204 135 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.78□□□□□ -2.28
ABCA3Q99758 AP003497.1-201ENST00000528472 562 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 AC006199.1-201ENST00000548728 219 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 AC080013.4-201ENST00000607624 649 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 MIR6759-201ENST00000638110 65 ntBASIC0.78□□□□□ -2.28
ABCA3Q99758 RNU6-222P-201ENST00000362438 107 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
ABCA3Q99758 RNU6-1151P-201ENST00000384684 107 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 RNU11-3P-201ENST00000391111 133 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
ABCA3Q99758 BTF3P8-201ENST00000414577 526 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 AC019070.1-201ENST00000415008 1024 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 AL035410.1-201ENST00000427409 427 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.78□□□□□ -2.29
ABCA3Q99758 AC117525.1-201ENST00000515228 503 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 SNORA31.6-201ENST00000516241 130 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC0.78□□□□□ -2.29
ABCA3Q99758 CYP2C61P-201ENST00000604072 290 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 U1.36-201ENST00000620684 176 ntBASIC0.78□□□□□ -2.29
ABCA3Q99758 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ABCA3Q99758 MIR95-201ENST00000385072 81 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA3Q99758 AC099513.1-201ENST00000490423 301 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ABCA3Q99758 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.77□□□□□ -2.29
ABCA3Q99758 CR383656.7-201ENST00000548164 174 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.77□□□□□ -2.29
ABCA3Q99758 AC027104.1-201ENST00000563702 681 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 AC005668.1-201ENST00000571142 476 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 AC087588.2-201ENST00000617667 426 ntBASIC0.77□□□□□ -2.29
ABCA3Q99758 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA3Q99758 AL392003.1-201ENST00000434394 243 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 AC114982.2-201ENST00000461396 358 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 HMGN2P9-201ENST00000476875 229 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 AL132857.1-201ENST00000555180 708 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.76□□□□□ -2.29
ABCA3Q99758 CYP4A27P-201ENST00000567218 190 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 AC008121.1-201ENST00000603244 268 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 AC021851.1-201ENST00000608537 1082 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 MIR338-201ENST00000636369 67 ntBASIC0.76□□□□□ -2.29
ABCA3Q99758 MIR424-201ENST00000362227 98 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 RNU6-288P-201ENST00000363690 104 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 MIR888-201ENST00000401186 77 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 MIR1912-201ENST00000410389 80 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 Z99497.1-201ENST00000421282 135 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC245047.4-201ENST00000433189 144 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA3Q99758 RPS27P23-201ENST00000487608 251 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA3Q99758 MTND5P11-201ENST00000511037 1812 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.75□□□□□ -2.29
ABCA3Q99758 AL121890.5-201ENST00000620848 304 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AL136313.1-201ENST00000624804 202 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 Z99571.1-201ENST00000636677 394 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
ABCA3Q99758 RNU6-1187P-201ENST00000364771 110 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.75□□□□□ -2.29
ABCA3Q99758 EIF4EP2-201ENST00000422816 654 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 MTCO1P53-201ENST00000441633 699 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC092685.1-201ENST00000447960 1243 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC006512.1-201ENST00000468816 291 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 RNU6-902P-201ENST00000517212 91 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC124947.2-202ENST00000552735 133 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 ABBA01006766.1-201ENST00000584728 294 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC010620.1-201ENST00000601088 1102 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AL391597.1-201ENST00000618707 694 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 AC024581.2-201ENST00000619986 252 ntBASIC0.75□□□□□ -2.29
ABCA3Q99758 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.75□□□□□ -2.29
ABCA3Q99758 ZNF680P1-201ENST00000436625 1469 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 Y_RNA.167-201ENST00000363735 109 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 SNORD1A-201ENST00000364968 72 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 UBE2V1P4-201ENST00000425374 344 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 AP1S2P1-201ENST00000457344 379 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 RNA5SP285-201ENST00000516619 119 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.74□□□□□ -2.29
ABCA3Q99758 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.74□□□□□ -2.29
ABCA3Q99758 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.74□□□□□ -2.29
ABCA3Q99758 AC009233.1-201ENST00000616477 371 ntBASIC0.74□□□□□ -2.29
ABCA3Q99758 RNU6-105P-201ENST00000363909 104 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 SNORA22-201ENST00000383907 134 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 SNORA22C-201ENST00000384614 134 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 HSPA8P13-201ENST00000523715 472 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 RAB11AP2-201ENST00000545905 639 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 NACAP3-201ENST00000552100 481 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 MIR4653-201ENST00000585107 83 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 AL391813.1-201ENST00000603098 260 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 AC022202.1-201ENST00000613515 211 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 AC110491.1-201ENST00000562191 2010 ntBASIC0.73□□□□□ -2.29
ABCA3Q99758 OR5T3-201ENST00000303059 1023 ntBASIC0.72□□□□□ -2.29
ABCA3Q99758 RNU1-23P-201ENST00000363361 144 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms