Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU2-3P-201ENST00000410144 191 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 VN1R36P-201ENST00000414936 291 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.13□□□□□ -1.91
NPAS1Q99742 MTCO3P46-201ENST00000425787 232 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 AC093151.1-201ENST00000427711 313 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.13□□□□□ -1.91
NPAS1Q99742 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS1Q99742 CYCSP32-201ENST00000440548 321 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 RNU7-138P-201ENST00000459479 64 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 RNU6-329P-201ENST00000459618 107 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 RNU6-1069P-201ENST00000516612 133 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 SNORA25.17-201ENST00000517184 124 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS1Q99742 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.13□□□□□ -1.91
NPAS1Q99742 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
NPAS1Q99742 U3.45-201ENST00000607547 219 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.13□□□□□ -1.91
NPAS1Q99742 RMST_4.1-201ENST00000616886 107 ntBASIC3.13□□□□□ -1.91
NPAS1Q99742 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.13□□□□□ -1.91
NPAS1Q99742 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NPAS1Q99742 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
NPAS1Q99742 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPAS1Q99742 Y_RNA.167-201ENST00000363735 109 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 U3.12-201ENST00000364498 214 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 SNORD81.2-201ENST00000365153 76 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 RNU6-1280P-201ENST00000365211 107 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 DYNLT3P1-201ENST00000378574 347 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 MIR449B-201ENST00000384995 97 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 RNU6-1106P-201ENST00000390845 107 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.12□□□□□ -1.91
NPAS1Q99742 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS1Q99742 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS1Q99742 TRIAP1P1-201ENST00000427062 225 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC005300.1-201ENST00000428401 373 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS1Q99742 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS1Q99742 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 SNRPEP8-201ENST00000442866 260 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AL031274.1-201ENST00000450334 232 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC012308.1-201ENST00000451232 178 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS1Q99742 RNU2-27P-201ENST00000516185 142 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.12□□□□□ -1.91
NPAS1Q99742 SCOCP1-201ENST00000554676 349 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS1Q99742 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
NPAS1Q99742 MIR3942-201ENST00000585264 109 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC091135.1-201ENST00000585943 307 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC008121.1-201ENST00000603244 268 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 APOOP1-201ENST00000604695 592 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC087045.1-201ENST00000605856 382 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AL022345.1-201ENST00000607292 135 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC025253.1-201ENST00000613623 543 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 uc_338.15-201ENST00000615470 191 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 ATP5A1P2-202ENST00000616464 443 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 RMST_7.1-201ENST00000621935 268 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPAS1Q99742 U6.105-201ENST00000637379 88 ntBASIC3.12□□□□□ -1.91
NPAS1Q99742 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
NPAS1Q99742 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NPAS1Q99742 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS1Q99742 MIR30E-201ENST00000362104 92 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 RNU6-858P-201ENST00000362436 107 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 MIR183-201ENST00000384958 110 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AC016831.2-201ENST00000417179 352 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 AP000907.1-201ENST00000428428 510 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AL159987.2-201ENST00000432754 307 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS1Q99742 RPL23AP22-201ENST00000437556 453 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS1Q99742 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.11□□□□□ -1.91
NPAS1Q99742 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 AC103851.1-201ENST00000506833 274 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS1Q99742 AC113155.1-201ENST00000511141 769 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 RNU6-864P-201ENST00000516256 108 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 Y_RNA.682-201ENST00000516457 100 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 Y_RNA.687-201ENST00000516558 91 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.11□□□□□ -1.91
NPAS1Q99742 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS1Q99742 AC026371.1-201ENST00000551867 419 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AC005476.1-201ENST00000554427 397 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 CYCSP39-201ENST00000565821 309 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 MIR92B-201ENST00000607575 96 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 AC099654.5-201ENST00000636479 350 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.11□□□□□ -1.91
NPAS1Q99742 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NPAS1Q99742 AL161912.2-201ENST00000565707 3007 ntBASIC3.11□□□□□ -1.91
NPAS1Q99742 MIR148B-201ENST00000362252 99 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 Z99755.1-201ENST00000414048 380 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 AL139396.1-201ENST00000421137 167 ntBASIC3.1□□□□□ -1.91
NPAS1Q99742 BPY2DP-201ENST00000422208 265 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms