Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC079395.3-201ENST00000615161 484 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AC025588.4-201ENST00000615802 908 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 UCA1.1-201ENST00000620952 75 ntBASIC0.18□□□□□ -2.38
COL12A1Q99715 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AC114982.1-201ENST00000469402 321 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.17□□□□□ -2.38
COL12A1Q99715 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
COL12A1Q99715 MRPS36P2-201ENST00000512569 299 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.17□□□□□ -2.38
COL12A1Q99715 OR8K4P-201ENST00000534608 872 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AC018618.2-201ENST00000604770 446 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC018755.4-201ENST00000619715 454 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC116563.2-201ENST00000624751 535 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
COL12A1Q99715 RNU6-654P-201ENST00000364373 107 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 RNU6-46P-201ENST00000383860 107 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AL645638.1-201ENST00000440519 361 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 MTND1P16-201ENST00000465177 898 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.17□□□□□ -2.38
COL12A1Q99715 RN7SKP287-201ENST00000516546 266 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AP003049.1-201ENST00000529418 457 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 MIR3678-201ENST00000578455 94 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 HSPE1P19-201ENST00000603327 295 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 CR848007.1-201ENST00000442354 1699 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 EDDM3CP-201ENST00000415977 425 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC098614.2-201ENST00000426040 255 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 CYP2C59P-201ENST00000457790 269 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.17□□□□□ -2.38
COL12A1Q99715 AL158211.1-201ENST00000566763 763 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 MIR4422-201ENST00000581938 83 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AL162730.1-201ENST00000605734 292 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 AC022202.1-201ENST00000613515 211 ntBASIC0.17□□□□□ -2.38
COL12A1Q99715 RNU1-36P-201ENST00000365130 165 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.16□□□□□ -2.38
COL12A1Q99715 RNU6-160P-201ENST00000384591 107 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 MIR635-201ENST00000384830 98 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RNU6-220P-201ENST00000390919 107 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 AC009518.2-201ENST00000418056 731 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.16□□□□□ -2.38
COL12A1Q99715 PTGES3P4-201ENST00000426243 356 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC0.16□□□□□ -2.38
COL12A1Q99715 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.16□□□□□ -2.38
COL12A1Q99715 RPS15AP27-201ENST00000449183 343 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RNU5F-8P-201ENST00000515941 111 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RNU7-40P-201ENST00000516397 64 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 SNORA48.10-201ENST00000516965 160 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 CIR1P1-201ENST00000524055 1133 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 AP004371.1-201ENST00000525240 214 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 MIR4661-201ENST00000582720 75 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 uc_338.17-201ENST00000619633 179 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RNU6-1327P-201ENST00000365302 105 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 AL355615.1-201ENST00000406187 641 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RPS26P42-201ENST00000413485 326 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.16□□□□□ -2.38
COL12A1Q99715 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC0.16□□□□□ -2.38
COL12A1Q99715 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.16□□□□□ -2.38
COL12A1Q99715 HSPE1P13-201ENST00000451143 297 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 MIR4305-201ENST00000583252 102 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 RPL30P11-203ENST00000598995 310 ntBASIC0.16□□□□□ -2.38
COL12A1Q99715 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.16□□□□□ -2.38
COL12A1Q99715 Y_RNA.86-201ENST00000363020 111 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 SNORA25.3-201ENST00000363205 127 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 RPS3AP1-201ENST00000413190 320 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.15□□□□□ -2.38
COL12A1Q99715 RPL37P21-201ENST00000435890 276 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 TPMTP4-201ENST00000450749 678 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 BX248409.1-201ENST00000455497 255 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 SYPL1P1-201ENST00000473622 768 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 RPL21P47-201ENST00000483696 477 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AC099513.1-201ENST00000490423 301 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AP001893.2-201ENST00000526949 202 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 MIR4713-201ENST00000582691 75 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.15□□□□□ -2.38
COL12A1Q99715 PART1_2.1-201ENST00000612397 250 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.15□□□□□ -2.38
COL12A1Q99715 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AP003400.5-201ENST00000624827 617 ntBASIC0.15□□□□□ -2.38
COL12A1Q99715 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.15□□□□□ -2.38
COL12A1Q99715 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
COL12A1Q99715 MIR1285-2-201ENST00000408311 88 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 MTCO2P8-201ENST00000412213 658 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 RPL21P111-201ENST00000418453 477 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AC025588.2-201ENST00000604851 466 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 GDI2P1-201ENST00000429312 1336 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 MT-TQ-201ENST00000387372 72 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AC096920.1-201ENST00000423991 241 ntBASIC0.15□□□□□ -2.39
COL12A1Q99715 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC0.15□□□□□ -2.39
COL12A1Q99715 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms