Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
SPENQ96T58 MRPS36P2-201ENST00000512569 299 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AC112206.3-201ENST00000514578 389 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 PCNAP1-202ENST00000595299 752 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AC004987.4-201ENST00000603383 338 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AC080013.4-201ENST00000607624 649 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SPENQ96T58 Y_RNA.790-201ENST00000614282 102 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 Y_RNA.782-201ENST00000614695 102 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AC079395.3-201ENST00000615161 484 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AC092192.1-201ENST00000633154 1018 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
SPENQ96T58 U3.29-201ENST00000391296 212 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.12□□□□□ -2.39
SPENQ96T58 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.12□□□□□ -2.39
SPENQ96T58 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.12□□□□□ -2.39
SPENQ96T58 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 AP002791.1-201ENST00000623291 381 ntBASIC0.12□□□□□ -2.39
SPENQ96T58 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.12□□□□□ -2.39
SPENQ96T58 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC0.12□□□□□ -2.39
SPENQ96T58 SNORD49B-201ENST00000365172 72 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.11□□□□□ -2.39
SPENQ96T58 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.11□□□□□ -2.39
SPENQ96T58 RNU6-889P-201ENST00000517189 103 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 RNY1P9-201ENST00000532431 109 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AC005832.3-201ENST00000537929 631 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.11□□□□□ -2.39
SPENQ96T58 AC147055.4-201ENST00000504399 745 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AL450336.1-201ENST00000605180 586 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 AL590410.1-201ENST00000617925 333 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AC130454.1-201ENST00000622948 401 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.11□□□□□ -2.39
SPENQ96T58 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.11□□□□□ -2.39
SPENQ96T58 MTCYBP34-201ENST00000439552 670 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 HMGB1P35-201ENST00000503360 598 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 LDHBP3-201ENST00000514909 822 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 RNU6-1004P-201ENST00000516584 111 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.11□□□□□ -2.39
SPENQ96T58 uc_338.17-201ENST00000619633 179 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 UCA1.1-201ENST00000620952 75 ntBASIC0.11□□□□□ -2.39
SPENQ96T58 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.1□□□□□ -2.39
SPENQ96T58 SNORA29-201ENST00000384183 140 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 RNU6-837P-201ENST00000391056 108 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 RNU2-64P-201ENST00000411315 191 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 VPS26BP1-201ENST00000417155 755 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 BPY2DP-201ENST00000422208 265 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 ZNF863P-201ENST00000426746 417 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AC119618.1-201ENST00000434191 222 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.1□□□□□ -2.39
SPENQ96T58 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
SPENQ96T58 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.1□□□□□ -2.39
SPENQ96T58 SNORA31.13-201ENST00000516624 135 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AP003072.4-201ENST00000624580 310 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
SPENQ96T58 AL034418.1-201ENST00000448675 860 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AP003122.4-201ENST00000530980 758 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.1□□□□□ -2.39
SPENQ96T58 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.1□□□□□ -2.39
SPENQ96T58 AL355877.2-201ENST00000603670 358 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AC123767.1-202ENST00000620407 817 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AC023347.2-201ENST00000433994 462 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.1□□□□□ -2.39
SPENQ96T58 AC004241.3-201ENST00000611728 517 ntBASIC0.1□□□□□ -2.39
SPENQ96T58 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.1□□□□□ -2.39
SPENQ96T58 RNY3P5-201ENST00000384127 102 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.09□□□□□ -2.39
SPENQ96T58 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.09□□□□□ -2.39
SPENQ96T58 SNORA31.8-201ENST00000516327 108 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 MIR892C-201ENST00000516410 77 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.09□□□□□ -2.39
SPENQ96T58 GDI2P1-201ENST00000429312 1336 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 RNU4-9P-201ENST00000364951 139 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 SNORA25-201ENST00000384384 134 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 MT-TQ-201ENST00000387372 72 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 SNORA40.19-201ENST00000390846 128 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 AC092047.1-201ENST00000424997 240 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.09□□□□□ -2.39
SPENQ96T58 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.09□□□□□ -2.39
SPENQ96T58 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC0.09□□□□□ -2.39
SPENQ96T58 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.09□□□□□ -2.4
SPENQ96T58 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
SPENQ96T58 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
SPENQ96T58 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC0.09□□□□□ -2.4
SPENQ96T58 RNA5SP165-201ENST00000517142 115 ntBASIC0.09□□□□□ -2.4
SPENQ96T58 SCARNA11.3-201ENST00000517276 130 ntBASIC0.09□□□□□ -2.4
SPENQ96T58 OR1M4P-201ENST00000589199 287 ntBASIC0.09□□□□□ -2.4
SPENQ96T58 AC025588.2-201ENST00000604851 466 ntBASIC0.09□□□□□ -2.4
SPENQ96T58 AC017083.3-201ENST00000609955 700 ntBASIC0.09□□□□□ -2.4
SPENQ96T58 SNORD3E-201ENST00000362899 217 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 SNORA4.1-201ENST00000364263 144 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AF213884.2-201ENST00000510417 903 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 AC021171.1-201ENST00000603137 706 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 MIR8065-201ENST00000620577 100 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 MIR7157-201ENST00000635801 60 ntBASIC0.08□□□□□ -2.4
SPENQ96T58 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms