Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.46□□□□□ -2.02
ZNF560Q96MR9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL139276.1-201ENST00000311910 1001 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RNY1P12-201ENST00000364251 105 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 SNORA3.2-201ENST00000408221 125 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RNA5SP425-201ENST00000410336 112 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC114491.1-201ENST00000416095 246 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MRPL42P6-201ENST00000486397 371 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RPL23AP49-201ENST00000492925 468 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 FAM92A1P2-202ENST00000504766 877 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RNU2-46P-201ENST00000517038 113 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 ADI1P3-201ENST00000549509 470 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC105245.1-201ENST00000581934 244 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC087045.1-201ENST00000605856 382 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL139286.2-201ENST00000606838 396 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MIR6895-201ENST00000613497 78 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC024940.5-201ENST00000622889 474 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC005858.4-201ENST00000623191 700 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AC138627.2-201ENST00000624202 601 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 ZNF658B-202ENST00000615961 3375 ntBASIC2.45□□□□□ -2.02
ZNF560Q96MR9 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.45□□□□□ -2.02
ZNF560Q96MR9 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AL049545.1-201ENST00000401856 572 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 RN7SKP192-201ENST00000411291 327 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 CYCSP46-201ENST00000423569 204 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 RPS3AP44-201ENST00000425466 790 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 RPS15AP9-201ENST00000439856 381 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC117522.1-201ENST00000509821 380 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC022616.3-201ENST00000523940 148 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 MIR3682-201ENST00000581338 84 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 MIR548AB-201ENST00000584917 84 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 RNU6-91P-201ENST00000607774 107 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC012409.4-201ENST00000612923 249 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AL603839.4-201ENST00000624658 1005 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 AC007494.3-201ENST00000624660 743 ntBASIC2.44□□□□□ -2.02
ZNF560Q96MR9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.44□□□□□ -2.02
ZNF560Q96MR9 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 SNORA38-201ENST00000363946 132 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 SNORA20.2-201ENST00000383922 131 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 SNORA75B-201ENST00000384053 137 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RPS3AP3-201ENST00000411933 242 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 Z98742.3-201ENST00000418637 326 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AC003685.2-201ENST00000422795 395 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AL445567.1-201ENST00000439121 144 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RAP1BP2-201ENST00000478270 544 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 TRBV12-1-201ENST00000479785 344 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AC018437.1-201ENST00000492214 406 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 ANXA2P1-201ENST00000505539 926 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 MTND4P2-201ENST00000507767 1203 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AC108078.2-201ENST00000510750 236 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RNU5B-3P-201ENST00000516601 115 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 IGLV3-17-201ENST00000519099 244 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 MIR5694-201ENST00000581190 76 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 AC005771.1-201ENST00000585581 349 ntBASIC2.43□□□□□ -2.02
ZNF560Q96MR9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.43□□□□□ -2.02
ZNF560Q96MR9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
ZNF560Q96MR9 MIR412-201ENST00000362142 91 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 Y_RNA.22-201ENST00000362492 102 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 U8.3-201ENST00000363321 132 ntBASIC2.42□□□□□ -2.02
ZNF560Q96MR9 SNORA24.1-201ENST00000384401 135 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms