Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU2-3P-201ENST00000410144 191 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 VN1R36P-201ENST00000414936 291 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 MYL8P-204ENST00000431574 518 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC233279.1-201ENST00000455300 423 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 snoU13.22-201ENST00000459428 104 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC084357.1-201ENST00000473404 255 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 RN7SL293P-201ENST00000481765 281 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 RN7SL283P-201ENST00000489055 303 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC022149.2-201ENST00000621061 203 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS50Q96JG6 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS50Q96JG6 AC068647.1-201ENST00000489539 2265 ntBASIC3.39□□□□□ -1.87
VPS50Q96JG6 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS50Q96JG6 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS50Q96JG6 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS50Q96JG6 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS50Q96JG6 Y_RNA.339-201ENST00000365325 102 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 MIR548F5-201ENST00000408421 86 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNU4-14P-201ENST00000410858 122 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNU6-607P-201ENST00000411283 108 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL592148.1-201ENST00000413568 445 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 AC092047.1-201ENST00000424997 240 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL512844.2-201ENST00000433990 593 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RPL12P25-201ENST00000455592 494 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNA5SP310-201ENST00000459084 116 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RPL30P5-201ENST00000494923 336 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNA5SP291-201ENST00000517222 105 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 AC025755.1-201ENST00000521306 278 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 RNU6-323P-201ENST00000521915 107 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 COPS8P3-201ENST00000526024 482 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 LRRC37A5P-203ENST00000580181 585 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 MIR3941-201ENST00000582572 103 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL356055.1-201ENST00000602528 446 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 MIR6076-201ENST00000617521 113 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 AL049641.1-201ENST00000441055 1948 ntBASIC3.38□□□□□ -1.87
VPS50Q96JG6 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS50Q96JG6 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS50Q96JG6 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VPS50Q96JG6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS50Q96JG6 FTLP6-201ENST00000355274 422 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 Y_RNA.11-201ENST00000362375 109 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 SNORD9-201ENST00000362566 104 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 Y_RNA.212-201ENST00000364177 102 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 RNU6-140P-201ENST00000384566 108 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 MIR23A-201ENST00000385245 73 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AL353621.1-201ENST00000418219 243 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC008716.1-201ENST00000511084 513 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 RNU2-27P-201ENST00000516185 142 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 SNORA64.4-201ENST00000516632 81 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 RNU6-1332P-201ENST00000516666 104 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 RNU6-566P-201ENST00000516790 107 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC007991.1-201ENST00000522680 631 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 HMGB1P14-201ENST00000557424 591 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 POLR3GP2-201ENST00000588366 668 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC007938.3-201ENST00000604965 623 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AL022345.1-201ENST00000607292 135 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 AL138726.1-201ENST00000614873 333 ntBASIC3.37□□□□□ -1.87
VPS50Q96JG6 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
VPS50Q96JG6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS50Q96JG6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS50Q96JG6 MFSD8-233ENST00000641482 4860 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RNU6-384P-201ENST00000364900 104 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 RNU6-395P-201ENST00000365662 106 ntBASIC3.36□□□□□ -1.87
VPS50Q96JG6 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms