Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC1.42□□□□□ -2.18
TOPBP1Q92547 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TOPBP1Q92547 NRON-201ENST00000517270 370 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 ZNF971P-201ENST00000562068 1249 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 AC090615.1-201ENST00000577519 154 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 MIR4637-201ENST00000582405 84 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 AC008121.1-201ENST00000603244 268 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 AC005034.5-201ENST00000604219 466 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 AC068276.1-201ENST00000605793 379 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.42□□□□□ -2.18
TOPBP1Q92547 AL603758.1-201ENST00000618654 241 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
TOPBP1Q92547 HAUS6P2-201ENST00000433254 2404 ntBASIC1.42□□□□□ -2.18
TOPBP1Q92547 RNA5SP193-201ENST00000410353 107 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.41□□□□□ -2.18
TOPBP1Q92547 FABP5P14-201ENST00000437273 393 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AF213884.2-201ENST00000510417 903 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.41□□□□□ -2.18
TOPBP1Q92547 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.41□□□□□ -2.18
TOPBP1Q92547 MIR4765-201ENST00000585007 77 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AP001542.1-201ENST00000591314 200 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AL589743.7-201ENST00000612637 233 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AL118556.2-201ENST00000614375 824 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AC109809.1-201ENST00000619665 545 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AC091925.1-201ENST00000623204 462 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.41□□□□□ -2.18
TOPBP1Q92547 MTND4P21-201ENST00000453886 1357 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 AL356473.1-201ENST00000406203 1408 ntBASIC1.41□□□□□ -2.18
TOPBP1Q92547 RNU6-28P-201ENST00000362378 107 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 Y_RNA.25-201ENST00000362528 102 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 VTRNA1-3-201ENST00000365645 89 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 Y_RNA.548-201ENST00000384656 105 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
TOPBP1Q92547 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.18
TOPBP1Q92547 AL356432.1-201ENST00000405809 419 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC093106.2-201ENST00000428212 385 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 MTCYBP15-201ENST00000433123 1127 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 RPS29P28-201ENST00000446439 141 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.4□□□□□ -2.18
TOPBP1Q92547 RN7SKP179-201ENST00000516126 217 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 MIR892C-201ENST00000516410 77 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 MIR4287-201ENST00000579398 78 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AL391813.1-201ENST00000603098 260 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC100814.1-201ENST00000606963 623 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AL121652.1-201ENST00000608851 448 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC024257.5-201ENST00000612739 531 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC084824.4-201ENST00000620106 731 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AP002791.1-201ENST00000623291 381 ntBASIC1.4□□□□□ -2.18
TOPBP1Q92547 AC009541.1-201ENST00000438279 2662 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
TOPBP1Q92547 MTND5P30-201ENST00000452896 1731 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 RNU6-216P-201ENST00000363282 104 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TOPBP1Q92547 MIR676-201ENST00000390702 67 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TOPBP1Q92547 AL161449.1-201ENST00000414531 1199 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.4□□□□□ -2.19
TOPBP1Q92547 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TOPBP1Q92547 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.4□□□□□ -2.19
TOPBP1Q92547 AL160314.1-201ENST00000490836 438 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 TMEM251P1-201ENST00000503717 318 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.4□□□□□ -2.19
TOPBP1Q92547 MIR4529-201ENST00000578110 78 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 AL627230.5-201ENST00000619807 58 ntBASIC1.4□□□□□ -2.19
TOPBP1Q92547 AC110491.1-201ENST00000562191 2010 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
TOPBP1Q92547 ZNF702P-202ENST00000434269 1966 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 RNU6-1078P-201ENST00000364522 103 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 RNU4-42P-201ENST00000364738 142 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AL512604.1-201ENST00000404812 257 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 RNU2-33P-201ENST00000410344 192 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 NDUFS5P4-201ENST00000412983 318 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 AL139421.1-201ENST00000423010 169 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC093155.1-201ENST00000440164 826 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC098831.1-201ENST00000440661 216 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 HSPE1P24-201ENST00000450782 238 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 RNU6-840P-201ENST00000517275 65 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC023632.1-201ENST00000518463 375 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 AP001189.2-201ENST00000527320 189 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC125611.1-201ENST00000549563 229 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC138915.2-201ENST00000569776 97 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC005951.2-201ENST00000576282 495 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 MIR3126-201ENST00000577443 74 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AL355297.2-201ENST00000604792 129 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AL390208.1-201ENST00000605885 644 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC239868.4-201ENST00000608318 671 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 AC005332.6-201ENST00000613178 446 ntBASIC1.39□□□□□ -2.19
TOPBP1Q92547 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.39□□□□□ -2.19
TOPBP1Q92547 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 MIR147B-201ENST00000390185 80 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 EDDM3CP-201ENST00000415977 425 ntBASIC1.38□□□□□ -2.19
TOPBP1Q92547 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.38□□□□□ -2.19
TOPBP1Q92547 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms