Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC245054.2-201ENST00000415639 319 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RPL30P5-201ENST00000494923 336 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC116337.1-201ENST00000509680 687 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC096745.1-201ENST00000509945 370 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RNU2-58P-201ENST00000516403 183 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC023632.4-201ENST00000517783 191 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC009902.1-201ENST00000519351 183 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 MIR5690-201ENST00000583739 73 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC022432.1-201ENST00000595739 310 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AC136601.2-201ENST00000604356 474 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 MIR6128-201ENST00000615528 109 ntBASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.43□□□□□ -1.86
ATG4AQ8WYN0 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 MIR23B-201ENST00000384832 97 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 MIR548P-201ENST00000408336 84 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP229-201ENST00000410809 99 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC245291.1-201ENST00000419501 328 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 BRK1P2-201ENST00000442875 223 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC115115.1-201ENST00000449927 248 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 SNORA84-201ENST00000459229 133 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AL049830.2-201ENST00000480072 201 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC027575.1-201ENST00000481064 460 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 RPL21P13-201ENST00000488305 481 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 RPL21P129-201ENST00000491732 478 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 FCF1P8-201ENST00000510322 597 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC092436.3-201ENST00000511788 257 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP165-201ENST00000517142 115 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC020661.2-201ENST00000560114 134 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 MIR3922-201ENST00000585192 84 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC006130.2-201ENST00000586202 326 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC005034.5-201ENST00000604219 466 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.42□□□□□ -1.86
ATG4AQ8WYN0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL049641.1-201ENST00000441055 1948 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 MIR369-201ENST00000362155 70 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.128-201ENST00000363391 112 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 Y_RNA.187-201ENST00000363918 113 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 RNU6-384P-201ENST00000364900 104 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 RNU6-1329P-201ENST00000365664 107 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 EI24P2-201ENST00000397776 1076 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 RNU2-68P-201ENST00000410878 191 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL592148.1-201ENST00000413568 445 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC092047.1-201ENST00000424997 240 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL645568.3-201ENST00000433683 316 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 CST9LP2-201ENST00000437612 320 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC125238.1-201ENST00000448842 249 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 ELOCP24-201ENST00000456370 334 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 NDUFB4P9-201ENST00000511646 388 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 RNA5SP309-201ENST00000516670 106 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 RNU1-54P-201ENST00000517181 120 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 TRMT10BP1-201ENST00000519377 943 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC025755.1-201ENST00000521306 278 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 OR1M4P-201ENST00000589199 287 ntBASIC3.41□□□□□ -1.86
ATG4AQ8WYN0 AC078795.3-201ENST00000602913 472 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms