Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HMGB4Q8WW32 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 RNU1-70P-201ENST00000362618 164 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.72-201ENST00000362894 103 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.279-201ENST00000364763 95 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC009161.1-201ENST00000417306 376 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 RPL21P111-201ENST00000418453 477 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL645937.1-202ENST00000421799 937 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 RPL35AP12-201ENST00000425362 338 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 HMGB1P9-201ENST00000429856 646 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 HIGD1AP11-201ENST00000438361 280 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 MTND3P10-201ENST00000450967 341 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 MRPS31P2-201ENST00000451581 518 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 FAM206BP-201ENST00000510179 541 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC010486.1-201ENST00000511793 424 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 SNORA14.1-201ENST00000516113 141 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 SNORA25.17-201ENST00000517184 124 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 RNU6-711P-201ENST00000517255 106 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC107934.2-201ENST00000518653 310 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL121579.1-201ENST00000555129 305 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 PSMA3P-201ENST00000555485 635 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 MIR4782-201ENST00000577987 79 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 MIR4738-201ENST00000579134 87 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 HMGN2P15-201ENST00000585707 270 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL645944.1-201ENST00000603857 493 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AC002044.1-201ENST00000606707 158 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 Z82243.1-201ENST00000609432 473 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 AL136221.1-201ENST00000621449 509 ntBASIC3.26□□□□□ -1.89
HMGB4Q8WW32 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HMGB4Q8WW32 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 SNORA80A-201ENST00000363922 136 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AL356057.2-201ENST00000403318 432 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 RPL7P10-201ENST00000417407 739 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 BPY2DP-201ENST00000422208 265 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AL031183.1-201ENST00000457667 207 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 RNU7-23P-201ENST00000459465 62 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC087884.1-201ENST00000469738 328 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC097462.2-201ENST00000504623 481 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC098799.2-201ENST00000509466 868 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 CYCSP27-201ENST00000527643 293 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AP002404.1-201ENST00000532005 451 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 CTHRC1P1-201ENST00000605383 469 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 uc_338.1-201ENST00000612113 180 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 MIR7106-201ENST00000612419 65 ntBASIC3.25□□□□□ -1.89
HMGB4Q8WW32 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
HMGB4Q8WW32 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 SNORA72.1-201ENST00000363485 129 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 RNU6-266P-201ENST00000364225 107 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 SNORA14A-201ENST00000364773 135 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 SNORA44-201ENST00000384584 132 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 Y_RNA.530-201ENST00000384587 101 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 EIF4E2P1-201ENST00000393781 255 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL356968.1-201ENST00000416622 474 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 USP9YP20-201ENST00000419224 558 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL513185.2-201ENST00000425543 193 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 RNU7-66P-201ENST00000459469 62 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL049830.2-201ENST00000480072 201 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AC079140.5-201ENST00000507882 310 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AC114786.4-201ENST00000508771 728 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 TBCAP3-201ENST00000512475 312 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 RNU6-1069P-201ENST00000516612 133 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 NACAP3-201ENST00000552100 481 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL163153.1-201ENST00000554223 283 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.24□□□□□ -1.89
HMGB4Q8WW32 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.24□□□□□ -1.89
HMGB4Q8WW32 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms