Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ARPC3P5-201ENST00000448802 534 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL159152.1-201ENST00000635019 2587 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6-288P-201ENST00000363690 104 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNA5SP212-201ENST00000391223 107 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RPL31P58-201ENST00000469001 379 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6-970P-201ENST00000516312 107 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC060771.1-201ENST00000582031 164 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 KATNBL1P5-201ENST00000605015 517 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL355802.4-201ENST00000607635 548 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL359314.1-201ENST00000616913 261 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MTND4P12-201ENST00000498999 1377 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU5E-1-201ENST00000362477 120 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL590233.1-201ENST00000430017 456 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL512661.1-201ENST00000434586 1253 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RPL30P6-201ENST00000475925 342 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC138853.1-201ENST00000503549 823 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR892C-201ENST00000516410 77 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC091965.5-201ENST00000624785 342 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC017037.3-201ENST00000625016 472 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 EDDM3CP-201ENST00000415977 425 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL158823.1-201ENST00000418441 478 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL035410.1-201ENST00000427409 427 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 Z80107.1-201ENST00000436830 412 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 LINC00557-201ENST00000563184 1279 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ADAM3B-201ENST00000569937 840 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR6134-201ENST00000617606 109 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR330-201ENST00000362196 94 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNA5SP276-201ENST00000362580 94 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR218-1-201ENST00000384999 110 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MTCO2P31-201ENST00000402702 684 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU2-33P-201ENST00000410344 192 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC127391.1-201ENST00000411737 98 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL078601.1-201ENST00000444542 271 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RPL23AP6-201ENST00000446637 472 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNORA48.11-201ENST00000517015 89 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AL512605.2-201ENST00000592972 256 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC146944.4-201ENST00000602697 718 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AP002906.1-201ENST00000603405 233 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC006270.3-201ENST00000605967 1036 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC004067.1-201ENST00000608733 700 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 U8.3-201ENST00000363321 132 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.245-201ENST00000364493 95 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6-1078P-201ENST00000364522 103 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU6-650P-201ENST00000365658 111 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 SNORA18.2-201ENST00000383865 132 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 Y_RNA.457-201ENST00000384237 111 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MIR513A1-201ENST00000385138 129 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC244636.1-201ENST00000421152 228 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 MICF-203ENST00000432679 129 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AC013267.1-201ENST00000458227 267 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RNU7-59P-201ENST00000459101 61 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 RN7SKP256-201ENST00000517201 314 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 AP003497.1-201ENST00000528472 562 ntBASIC0.33□□□□□ -2.36
SYNE1Q8NF91 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
SYNE1Q8NF91 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
SYNE1Q8NF91 RNU6-40P-201ENST00000384254 107 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 MIR30A-201ENST00000385092 71 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 HMGN1P14-201ENST00000412459 517 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC092634.6-201ENST00000418558 192 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 SNRPEP10-201ENST00000420249 274 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 SDAD1P3-201ENST00000427380 333 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 MRPL42P4-201ENST00000453267 443 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC018437.1-201ENST00000492214 406 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 RNU6-1256P-201ENST00000516539 103 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC125611.1-201ENST00000549563 229 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC040174.2-201ENST00000602701 465 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC068276.1-201ENST00000605793 379 ntBASIC0.32□□□□□ -2.36
SYNE1Q8NF91 AC091925.2-201ENST00000625059 256 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms