Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 RNU1-105P-201ENST00000363470 161 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 U3.8-201ENST00000363675 217 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC009518.2-201ENST00000418056 731 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 NDUFB4P7-201ENST00000423198 363 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC092047.1-201ENST00000424997 240 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 HMGB1P22-201ENST00000505315 124 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC073308.1-201ENST00000623696 305 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RNU1-124P-201ENST00000363861 145 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 U3.13-201ENST00000364804 214 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 HNRNPDP2-201ENST00000406475 478 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RNU6-575P-201ENST00000411326 105 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RPS3AP1-201ENST00000413190 320 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RPL22P18-201ENST00000417197 377 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AL590556.1-201ENST00000423231 483 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 MTND5P8-201ENST00000449817 1083 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RNU7-157P-201ENST00000459600 66 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AP001025.1-201ENST00000486139 332 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 RNU7-40P-201ENST00000516397 64 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC115085.1-201ENST00000588924 229 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC040174.2-201ENST00000602701 465 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AL355816.1-201ENST00000607951 118 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AP003400.5-201ENST00000624827 617 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 AC091925.2-201ENST00000625059 256 ntBASIC0.2□□□□□ -2.38
CCDC168Q8NDH2 EIF4EP4-201ENST00000424916 578 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 MICF-203ENST00000432679 129 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 AC087897.1-201ENST00000550134 156 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 AC004241.3-201ENST00000611728 517 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 Y_RNA.403-201ENST00000383977 101 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 MIR493-201ENST00000385254 89 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 UBE2D3P2-201ENST00000424409 445 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 AC098614.2-201ENST00000426040 255 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 GTF2IP13-201ENST00000438487 386 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 AL034418.1-201ENST00000448675 860 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 MRPS36P2-201ENST00000512569 299 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 HMGB1P14-201ENST00000557424 591 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 AL365204.3-201ENST00000612448 685 ntBASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.19□□□□□ -2.38
CCDC168Q8NDH2 Y_RNA.181-201ENST00000363872 101 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 SNORA32.3-201ENST00000384772 121 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 MTCO2P8-201ENST00000412213 658 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 SYPL1P1-201ENST00000473622 768 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AP003049.1-201ENST00000529418 457 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 MTND2P13-201ENST00000577438 1039 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 OR1M4P-201ENST00000589199 287 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 RNU4-5P-201ENST00000607255 135 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AL161629.2-201ENST00000615347 275 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC116563.2-201ENST00000624751 535 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 MIR4496-201ENST00000635896 61 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 RNU6-119P-201ENST00000364882 107 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 RNU6-302P-201ENST00000365249 107 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 RNU6-338P-201ENST00000383888 105 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC092001.1-201ENST00000453012 261 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 COX6CP6-201ENST00000490840 228 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 RNA5SP404-201ENST00000517118 132 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC021749.1-201ENST00000604322 607 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.18□□□□□ -2.38
CCDC168Q8NDH2 AC110792.3-201ENST00000595906 1614 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 RNU6-160P-201ENST00000384591 107 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 RNU6-220P-201ENST00000390919 107 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 RNA5SP222-201ENST00000411039 105 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC114982.1-201ENST00000469402 321 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC136628.3-201ENST00000521868 290 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC022254.1-201ENST00000567857 235 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 MIR4764-201ENST00000580680 88 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 HMGN2P15-201ENST00000585707 270 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC022202.1-201ENST00000613515 211 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AL078604.3-201ENST00000615580 211 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AC006963.1-201ENST00000624003 1052 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AL512506.2-201ENST00000624472 458 ntBASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.17□□□□□ -2.38
CCDC168Q8NDH2 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 SNORA4.1-201ENST00000364263 144 ntBASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 AC096920.1-201ENST00000423991 241 ntBASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 AC244023.1-201ENST00000426884 112 ntBASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 RPEP5-201ENST00000441137 268 ntBASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 RPS26P55-201ENST00000471178 356 ntBASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.16□□□□□ -2.38
CCDC168Q8NDH2 AC093677.1-201ENST00000514414 678 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms