Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC89Q8N998 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC89Q8N998 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC89Q8N998 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AL139276.1-201ENST00000311910 1001 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 RNU6-1097P-201ENST00000363586 107 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 SNORD115-7-201ENST00000365306 82 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 MIR95-201ENST00000385072 81 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 MTND3P17-201ENST00000416968 344 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC112220.1-201ENST00000434628 355 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 Y_RNA.687-201ENST00000516558 91 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC060788.1-201ENST00000521318 469 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 DUXAP5-201ENST00000529668 529 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AP002453.2-201ENST00000533503 320 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC105137.2-201ENST00000569073 466 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC245014.2-201ENST00000603689 287 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AC246785.4-201ENST00000605374 287 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 AL121917.1-203ENST00000605534 577 ntBASIC2.78□□□□□ -1.96
CCDC89Q8N998 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC89Q8N998 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC89Q8N998 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC89Q8N998 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC89Q8N998 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.97
CCDC89Q8N998 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
CCDC89Q8N998 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
CCDC89Q8N998 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 RNU1-91P-201ENST00000364746 163 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 RNU6-384P-201ENST00000364900 104 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 MIR23B-201ENST00000384832 97 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AL139132.1-201ENST00000431587 344 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC009238.1-201ENST00000442165 424 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC009237.6-201ENST00000446969 424 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 MTND3P7-201ENST00000474435 343 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 SNORA18.6-201ENST00000516792 115 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 OR5AL2P-201ENST00000532185 920 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 MTCYBP33-201ENST00000575007 1130 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 MIR4635-201ENST00000583759 79 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 RPL30P11-203ENST00000598995 310 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AC025165.5-201ENST00000602802 578 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 AL713866.2-201ENST00000603579 219 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 Z94722.1-201ENST00000604328 474 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 MIR203B-201ENST00000636080 86 ntBASIC2.77□□□□□ -1.97
CCDC89Q8N998 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
CCDC89Q8N998 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC89Q8N998 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 Y_RNA.367-201ENST00000365544 101 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 RNU6-108P-201ENST00000365558 107 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 SNORD116-20-201ENST00000384529 92 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 RNU6-297P-201ENST00000384636 107 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 MIR561-201ENST00000385216 97 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AL138827.1-201ENST00000402666 306 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AF274854.1-201ENST00000413236 615 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 OR6C66P-201ENST00000414917 930 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 C1DP2-201ENST00000418167 426 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 PGBD4P6-201ENST00000421501 610 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 RPL31P35-201ENST00000431058 377 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AL022238.1-201ENST00000442557 355 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 MTCYBP1-201ENST00000454315 1119 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 SRIP1-201ENST00000489235 288 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 TBCAP3-201ENST00000512475 312 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 MIR4325-201ENST00000583049 90 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC060766.3-201ENST00000591442 263 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 CLIC4P2-201ENST00000601934 717 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 SEPT7P9-203ENST00000604116 343 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AP001486.3-201ENST00000615334 372 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 uc_338.15-201ENST00000615470 191 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC026585.1-201ENST00000619582 524 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC012640.5-201ENST00000623897 319 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 AC120349.3-201ENST00000624377 529 ntBASIC2.76□□□□□ -1.97
CCDC89Q8N998 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
CCDC89Q8N998 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC89Q8N998 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC89Q8N998 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms