Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RPS3AP36-201ENST00000398190 775 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RNU2-36P-201ENST00000410361 191 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RPS12P24-201ENST00000412619 387 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 USP9YP6-201ENST00000413550 854 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AL096701.2-201ENST00000416920 238 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 BX295541.1-201ENST00000417774 250 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC133104.1-201ENST00000429100 218 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 MTND1P1-201ENST00000445453 368 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC132479.1-201ENST00000449160 144 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC090096.1-201ENST00000489168 390 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 HMGB1P29-201ENST00000505659 499 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 RNU6-677P-201ENST00000516914 101 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC090572.1-201ENST00000519251 160 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC023824.2-201ENST00000566185 400 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 DEFB131E-202ENST00000602581 683 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 AC138649.3-201ENST00000622154 254 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.64□□□□□ -1.99
RTL3Q8N8U3 OR5AK4P-201ENST00000635912 903 ntBASIC2.64□□□□□ -1.99
RTL3Q8N8U3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 SNORA38-201ENST00000363946 132 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RNU6-19P-201ENST00000384718 107 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 MIR196B-201ENST00000384852 84 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.619-201ENST00000410951 90 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC127391.1-201ENST00000411737 98 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RPS15AP12-201ENST00000419498 388 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC007283.2-201ENST00000424739 197 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RPS3AP44-201ENST00000425466 790 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 PTGES3P4-201ENST00000426243 356 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC137499.1-201ENST00000427602 88 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RPL31P35-201ENST00000431058 377 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 MTCO2P11-201ENST00000431069 680 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 C1DP4-201ENST00000455429 424 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AL441985.1-201ENST00000457727 251 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 SRIP1-201ENST00000489235 288 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RPL9P6-201ENST00000492764 598 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC107401.1-201ENST00000503426 685 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 SNORA31.6-201ENST00000516241 130 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 OR5BN1P-201ENST00000532955 829 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 ELOCP31-201ENST00000540463 467 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.63□□□□□ -1.99
RTL3Q8N8U3 MIR4782-201ENST00000577987 79 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 MIR5092-201ENST00000583139 88 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 MIR4765-201ENST00000585007 77 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AL365204.3-201ENST00000612448 685 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AL133173.2-201ENST00000614270 90 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AC068792.1-201ENST00000621354 417 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 AL512643.1-201ENST00000635735 524 ntBASIC2.63□□□□□ -1.99
RTL3Q8N8U3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 HSPE1P11-201ENST00000339579 310 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 Y_RNA.6-201ENST00000362350 114 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-282P-201ENST00000365357 103 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-108P-201ENST00000365558 107 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 SNORA20.2-201ENST00000383922 131 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-443P-201ENST00000384780 107 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 GSTA9P-201ENST00000406231 611 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC080125.1-201ENST00000414888 684 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 MTCO3P30-201ENST00000426425 670 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AL358934.1-201ENST00000432346 324 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC119618.1-201ENST00000434191 222 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RPS3AP17-201ENST00000472594 777 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-1183P-201ENST00000517054 60 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 SCARNA3-201ENST00000517097 143 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-1220P-201ENST00000517126 108 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 MTND1P5-201ENST00000517906 940 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC016957.1-201ENST00000534895 309 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC087883.1-201ENST00000551882 391 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 TPRKBP2-201ENST00000565969 475 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 uc_338.14-201ENST00000613162 166 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 Z99571.1-201ENST00000636677 394 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 MTND5P42-201ENST00000637720 498 ntBASIC2.62□□□□□ -1.99
RTL3Q8N8U3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RTL3Q8N8U3 RNU6-181P-201ENST00000363225 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms