Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF7Q8N684 MTND4P14-201ENST00000435799 1354 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 MTND4P35-201ENST00000604257 1375 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF7Q8N684 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 Y_RNA.33-201ENST00000362591 102 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6-552P-201ENST00000362869 119 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6-1090P-201ENST00000364065 94 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 Y_RNA.402-201ENST00000383972 102 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 Y_RNA.450-201ENST00000384198 113 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 SNORD115-47-201ENST00000391226 86 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6-903P-201ENST00000391270 109 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RN7SKP220-201ENST00000410611 288 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6-1025P-201ENST00000410629 104 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 HMGN2P30-201ENST00000423237 256 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 USP9YP18-201ENST00000425912 695 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 SNRPFP3-201ENST00000457792 225 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC011352.1-201ENST00000512300 793 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 RNU6-718P-201ENST00000516166 105 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 SNORD59.2-201ENST00000516873 68 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC107016.2-201ENST00000547968 190 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 RPL12P50-201ENST00000603116 116 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AL162413.1-201ENST00000603198 110 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 AC006023.1-201ENST00000603944 259 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 U6atac.1-201ENST00000616025 117 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 MIR1321-201ENST00000637766 79 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF7Q8N684 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CPSF7Q8N684 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.8□□□□□ -1.96
CPSF7Q8N684 HSPA8P4-201ENST00000511877 1920 ntBASIC2.8□□□□□ -1.96
CPSF7Q8N684 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF7Q8N684 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AL139276.1-201ENST00000311910 1001 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 RNU6-395P-201ENST00000365662 106 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 SNORD37.1-201ENST00000390968 65 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 CIR1P3-201ENST00000405137 479 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 MTCO1P20-201ENST00000425366 358 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 RPL26P9-201ENST00000457466 433 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 AL121769.1-201ENST00000469473 401 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 RNA5SP401-201ENST00000515920 127 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 SNORA9.3-201ENST00000516383 129 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 RNU6-835P-201ENST00000516974 104 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 MTND4LP26-201ENST00000518144 282 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF7Q8N684 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC109635.3-201ENST00000529536 185 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 HIF1AP1-201ENST00000553642 175 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 AL391261.3-201ENST00000557194 520 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 MIR4672-201ENST00000583126 81 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 MIR548AC-201ENST00000585049 88 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 BNIP3P30-201ENST00000601184 574 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC107304.1-201ENST00000604229 296 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.79□□□□□ -1.96
CPSF7Q8N684 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC000403.1-201ENST00000613696 3585 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 AC233263.6-201ENST00000631132 1963 ntBASIC2.79□□□□□ -1.96
CPSF7Q8N684 AL354685.2-201ENST00000448218 1447 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CPSF7Q8N684 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CPSF7Q8N684 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 RNY4P14-201ENST00000363656 96 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 SNORA25.6-201ENST00000364121 118 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 SNORA14A-201ENST00000364773 135 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF7Q8N684 BTF3P7-201ENST00000407097 488 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 EEF1A1P40-201ENST00000412883 573 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.78□□□□□ -1.96
CPSF7Q8N684 HSPE1P1-201ENST00000421494 318 ntBASIC2.78□□□□□ -1.96
CPSF7Q8N684 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.78□□□□□ -1.96
CPSF7Q8N684 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.78□□□□□ -1.96
CPSF7Q8N684 AC000111.3-201ENST00000433478 193 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms