Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC022080.3-201ENST00000544433 482 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 NACAP3-201ENST00000552100 481 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 OR11H5P-201ENST00000554039 926 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AL163153.1-201ENST00000554223 283 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AL391261.3-201ENST00000557194 520 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC073539.2-201ENST00000597113 165 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 Z82243.1-201ENST00000609432 473 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC006504.8-201ENST00000621046 635 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC091903.1-201ENST00000624322 454 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 U6.99-201ENST00000637524 83 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.89□□□□□ -1.95
BEST3Q8N1M1 AC010680.1-201ENST00000590024 3590 ntBASIC2.89□□□□□ -1.95
BEST3Q8N1M1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RNU6-198P-201ENST00000384258 104 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RNA5SP252-201ENST00000391131 119 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL122016.1-201ENST00000403365 367 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 BX682237.1-201ENST00000415016 335 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RPL32P35-201ENST00000415214 394 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 HSPE1P1-201ENST00000421494 318 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL353729.1-201ENST00000425044 720 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 SKA2P1-201ENST00000425592 390 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC007560.1-201ENST00000426912 237 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL714022.1-201ENST00000439897 151 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL078601.1-201ENST00000444542 271 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RNU6-1208P-201ENST00000459588 107 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 HMGN2P26-201ENST00000463169 339 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 MTCYBP18-201ENST00000501056 747 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RNA5SP217-201ENST00000515959 91 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC009812.2-201ENST00000517657 457 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL118558.2-201ENST00000556294 238 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 H3F3AP1-201ENST00000559984 334 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 MIR4782-201ENST00000577987 79 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL645944.1-201ENST00000603857 493 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AL035413.2-201ENST00000604801 525 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 AC099654.14-201ENST00000638599 341 ntBASIC2.88□□□□□ -1.95
BEST3Q8N1M1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
BEST3Q8N1M1 CASC19-280ENST00000642102 1351 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.378-201ENST00000365652 113 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 SNORD15B-201ENST00000384714 146 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RPL21P3-201ENST00000395517 478 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RPS4XP7-201ENST00000406274 780 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 Y_RNA.623-201ENST00000411128 95 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RNU6-607P-201ENST00000411283 108 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 POLHP1-201ENST00000411806 470 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 NDUFB4P5-201ENST00000415445 361 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC009161.1-201ENST00000417306 376 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RPL30P16-201ENST00000419341 429 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RPL35AP12-201ENST00000425362 338 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AL627311.1-201ENST00000431514 115 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC146507.2-201ENST00000460608 476 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC128713.1-201ENST00000471495 306 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RPL21P93-201ENST00000480465 489 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 MTND3P25-201ENST00000509243 135 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 RNU6-189P-201ENST00000516120 101 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC118273.2-201ENST00000532092 465 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 EIF4BP1-201ENST00000554881 351 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AL137843.1-201ENST00000605078 385 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 BNIP3P10-201ENST00000605360 577 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AC092807.2-201ENST00000609367 243 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 AL031601.2-202ENST00000622650 282 ntBASIC2.87□□□□□ -1.95
BEST3Q8N1M1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms