Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
SIX5Q8N196 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX5Q8N196 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 NOL8P1-201ENST00000508336 3529 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 MIR411-201ENST00000362239 96 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 RNU6-942P-201ENST00000363002 107 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 SNORA29-201ENST00000384183 140 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 RNU6-318P-201ENST00000384283 103 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIX5Q8N196 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX5Q8N196 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX5Q8N196 VDAC1P3-201ENST00000434069 851 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC098831.1-201ENST00000440661 216 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 PHBP16-201ENST00000446318 950 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX5Q8N196 AC012308.1-201ENST00000451232 178 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC079168.2-201ENST00000453977 416 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX5Q8N196 S100A11P1-201ENST00000477525 312 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC078817.1-201ENST00000492623 435 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 BTF3L4P4-201ENST00000506381 449 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC091874.1-201ENST00000511402 339 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 RNU7-110P-201ENST00000516891 62 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC016256.1-201ENST00000547971 354 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX5Q8N196 AL356157.2-201ENST00000605122 111 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 U3.53-201ENST00000628922 216 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX5Q8N196 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SIX5Q8N196 HAUS6P2-201ENST00000433254 2404 ntBASIC4.81□□□□□ -1.64
SIX5Q8N196 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX5Q8N196 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.8□□□□□ -1.64
SIX5Q8N196 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX5Q8N196 SCN1A-220ENST00000641603 12506 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SIX5Q8N196 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SIX5Q8N196 RNU6-545P-201ENST00000362681 104 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNU6-778P-201ENST00000363269 103 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNA5SP189-201ENST00000364920 115 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 Y_RNA.319-201ENST00000365138 92 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNU6-746P-201ENST00000384112 109 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNU6-514P-201ENST00000384208 107 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 Y_RNA.504-201ENST00000384481 104 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNA5SP171-201ENST00000391071 115 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 MTHFD2P2-201ENST00000407725 247 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX5Q8N196 RPS29P17-201ENST00000430795 166 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 AC125238.1-201ENST00000448842 249 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX5Q8N196 AL645939.1-201ENST00000453429 797 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RN7SL558P-201ENST00000497468 299 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RNU2-31P-201ENST00000516954 155 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 AC025884.1-201ENST00000556034 378 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 MIR4643-201ENST00000577473 78 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 MIR5695-201ENST00000579717 85 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 AL138963.2-201ENST00000605137 226 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 U2.21-201ENST00000637295 81 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.8□□□□□ -1.64
SIX5Q8N196 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX5Q8N196 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SIX5Q8N196 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 AC008079.2-201ENST00000623543 20396 ntBASIC4.8□□□□□ -1.64
SIX5Q8N196 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX5Q8N196 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SIX5Q8N196 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX5Q8N196 RNA5SP361-201ENST00000362686 118 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RNU6-774P-201ENST00000363238 107 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RNU6-326P-201ENST00000365480 107 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.79□□□□□ -1.64
SIX5Q8N196 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.79□□□□□ -1.64
SIX5Q8N196 RN7SKP177-201ENST00000410567 355 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC017079.2-201ENST00000416102 485 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC011998.1-201ENST00000433403 117 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AL591473.1-201ENST00000464297 313 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC105137.1-201ENST00000484355 562 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RN7SL810P-201ENST00000493031 276 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC023141.12-201ENST00000512399 199 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RNA5SP468-201ENST00000516782 93 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 AC105129.1-201ENST00000560250 297 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.79□□□□□ -1.64
SIX5Q8N196 AL021997.2-201ENST00000615674 271 ntBASIC4.79□□□□□ -1.64
SIX5Q8N196 RNA5SP196-201ENST00000625967 102 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms