Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4BQ8IWT1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
SCN4BQ8IWT1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
SCN4BQ8IWT1 MTND4P35-201ENST00000604257 1375 ntBASIC3.24□□□□□ -1.89
SCN4BQ8IWT1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AL079305.1-201ENST00000623159 3008 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC000403.1-201ENST00000613696 3585 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RNU1-75P-201ENST00000347264 129 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.72-201ENST00000362894 103 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RNU6-522P-201ENST00000364497 107 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.378-201ENST00000365652 113 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.399-201ENST00000383955 105 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 MIR578-201ENST00000384828 96 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RPL5P18-201ENST00000406671 891 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RN7SKP220-201ENST00000410611 288 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.615-201ENST00000410769 117 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 BX682237.1-201ENST00000415016 335 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RPL32P35-201ENST00000415214 394 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC099548.1-201ENST00000421443 426 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AL513185.2-201ENST00000425543 193 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 PRPS1P1-201ENST00000445305 876 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC006539.3-201ENST00000454258 129 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RNU7-167P-201ENST00000459160 62 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC022493.1-201ENST00000492984 337 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC112206.3-201ENST00000514578 389 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 RNA5SP217-201ENST00000515959 91 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 OR11H5P-201ENST00000554039 926 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 H3F3AP1-201ENST00000559984 334 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 MTCO3P23-201ENST00000561363 289 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC022418.1-201ENST00000624118 445 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC090617.10-201ENST00000624308 134 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SCN4BQ8IWT1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.100-201ENST00000363141 102 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RNA5SP139-201ENST00000364340 117 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.303-201ENST00000364998 94 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RNU6-1179P-201ENST00000384667 107 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL162578.1-201ENST00000406202 378 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RNA5SP31-201ENST00000411144 127 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 POLHP1-201ENST00000411806 470 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RPL21P111-201ENST00000418453 477 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL590639.1-201ENST00000456484 337 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC007547.1-201ENST00000462177 490 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 DYNLL1P5-201ENST00000467158 270 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RPL21P93-201ENST00000480465 489 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC139453.3-201ENST00000493276 369 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC098799.2-201ENST00000509466 868 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 RNU6-189P-201ENST00000516120 101 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 Y_RNA.665-201ENST00000516177 98 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC009902.1-201ENST00000519351 183 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC023050.3-201ENST00000541142 333 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 MIR3941-201ENST00000582572 103 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC073539.2-201ENST00000597113 165 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC012119.1-201ENST00000603184 222 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC092747.3-201ENST00000603769 301 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL355598.1-201ENST00000604169 202 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 Z82243.1-201ENST00000609432 473 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AC004852.3-201ENST00000614131 326 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL008636.1-201ENST00000625038 1018 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 AL137790.1-201ENST00000634283 177 ntBASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.22□□□□□ -1.89
SCN4BQ8IWT1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 MIR412-201ENST00000362142 91 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 SNORA72.1-201ENST00000363485 129 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 SNORA44-201ENST00000384584 132 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 RNA5SP219-201ENST00000390940 113 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 RPS4XP7-201ENST00000406274 780 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 COTL1P1-201ENST00000422309 375 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 HMGN2P30-201ENST00000423237 256 ntBASIC3.21□□□□□ -1.9
SCN4BQ8IWT1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms