Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AP002360.4-201ENST00000606980 481 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 MIR7844-201ENST00000616161 122 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 AC092140.2-201ENST00000618027 521 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 Z75746.1-201ENST00000440243 2080 ntBASIC2.03□□□□□ -2.08
NUDCD3Q8IVD9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.03□□□□□ -2.09
NUDCD3Q8IVD9 HSPA8P4-201ENST00000511877 1920 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 Y_RNA.33-201ENST00000362591 102 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 SNORD56.2-201ENST00000363242 71 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RNU1-91P-201ENST00000364746 163 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 SNORA75B-201ENST00000384053 137 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RPL17P50-201ENST00000396131 546 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 SNORA11.4-201ENST00000408823 129 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC010099.3-201ENST00000423896 409 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC007283.2-201ENST00000424739 197 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC027124.2-201ENST00000428249 105 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 MYL8P-204ENST00000431574 518 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RPL23AP30-201ENST00000432419 501 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC124916.1-201ENST00000444020 547 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AL441985.1-201ENST00000457727 251 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RPL36AP48-201ENST00000485521 314 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 RPL22P13-201ENST00000493291 347 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC010587.1-201ENST00000505809 469 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 MTND4P2-201ENST00000507767 1203 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 SNORA31.25-201ENST00000517242 134 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 MTND1P24-201ENST00000552175 861 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 SNRPGP18-201ENST00000553000 214 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 ANP32BP3-201ENST00000559213 706 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 MIR1273C-201ENST00000578669 77 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AL359999.1-201ENST00000604513 294 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC004223.4-201ENST00000612426 332 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC017037.3-201ENST00000625016 472 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 AC243829.7-201ENST00000633081 225 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 IGHVIII-44-202ENST00000636235 289 ntBASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
NUDCD3Q8IVD9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 RNU5F-7P-201ENST00000363696 115 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 MIR23A-201ENST00000385245 73 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 UBE2V1P2-201ENST00000397758 440 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 BTF3P7-201ENST00000407097 488 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC097463.2-201ENST00000421074 142 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC119618.1-201ENST00000434191 222 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 HIGD1AP2-201ENST00000446367 280 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 FABP5P13-201ENST00000452144 328 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AP000797.1-201ENST00000478870 387 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC008413.1-201ENST00000511864 177 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 RNU6-1129P-201ENST00000515964 104 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 CYCSP26-201ENST00000534107 320 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AL133241.1-201ENST00000556832 487 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC009094.1-201ENST00000564443 426 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 RNU6-87P-201ENST00000607561 108 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC138749.5-201ENST00000611461 208 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC116165.2-201ENST00000616705 206 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC244517.12-201ENST00000623581 663 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 AC138627.2-201ENST00000624202 601 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 CENPCP1-201ENST00000533085 2578 ntBASIC2.01□□□□□ -2.09
NUDCD3Q8IVD9 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 RNU6-39P-201ENST00000384344 107 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AL589872.1-201ENST00000426602 288 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 UBE2D3P1-201ENST00000436669 444 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 RPL7P12-201ENST00000446719 750 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AL583843.1-201ENST00000456070 346 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC112771.1-201ENST00000463581 102 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC008526.1-201ENST00000509149 338 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AF213884.2-201ENST00000510417 903 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 MRPS33P3-201ENST00000513456 322 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 EEF1A1P37-201ENST00000522748 715 ntBASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2□□□□□ -2.09
NUDCD3Q8IVD9 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms