Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MTCO3P40-201ENST00000392516 676 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 RNU4-46P-201ENST00000410818 138 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 EEF1A1P40-201ENST00000412883 573 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AL353193.1-201ENST00000421444 268 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 TIMM9P3-201ENST00000428659 274 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 HMGN2P10-201ENST00000448085 265 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 MTND1P18-201ENST00000448191 573 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 PSPHP1-201ENST00000450062 261 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 RNU7-26P-201ENST00000458980 63 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 RPL21P41-201ENST00000459863 264 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 RPS29P2-201ENST00000479278 136 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC022493.1-201ENST00000492984 337 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 GZMAP1-201ENST00000503054 631 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 SNORA31.19-201ENST00000517079 126 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AP001893.2-201ENST00000526949 202 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC009163.5-201ENST00000575421 637 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 MIR4782-201ENST00000577987 79 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 MIR548AC-201ENST00000585049 88 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AP001330.5-201ENST00000607176 411 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC093732.2-201ENST00000607950 274 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 uc_338.14-201ENST00000613162 166 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 AC099654.12-201ENST00000639868 649 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 HSPA8P4-201ENST00000511877 1920 ntBASIC2.72□□□□□ -1.97
NUP54Q7Z3B4 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
NUP54Q7Z3B4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.71□□□□□ -1.97
NUP54Q7Z3B4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AL139276.1-201ENST00000311910 1001 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 SNORA9.2-201ENST00000365361 133 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 RNU6-116P-201ENST00000384042 109 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 SNORA75B-201ENST00000384053 137 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 MIR128-1-201ENST00000384921 82 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC068050.1-201ENST00000394891 380 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 UBE2V1P2-201ENST00000397758 440 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 RNU2-29P-201ENST00000410423 189 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 MTCO3P30-201ENST00000426425 670 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 MTND3P21-201ENST00000433774 331 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AL078601.1-201ENST00000444542 271 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 RNU7-63P-201ENST00000459054 62 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC092436.1-201ENST00000506450 503 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC022880.1-201ENST00000534017 973 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC021739.1-201ENST00000559631 174 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC008752.3-201ENST00000588113 712 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 DEFB131E-202ENST00000602581 683 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC005000.2-201ENST00000605468 310 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AL359880.1-201ENST00000621879 266 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC091953.5-201ENST00000622919 233 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 AC139792.3-201ENST00000623525 224 ntBASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
NUP54Q7Z3B4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 OR4G2P-201ENST00000328113 903 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 MIR412-201ENST00000362142 91 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 RNU6-371P-201ENST00000364283 108 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 RNU6-166P-201ENST00000384371 107 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 Y_RNA.481-201ENST00000384373 102 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AL139039.1-201ENST00000401900 692 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC007560.1-201ENST00000426912 237 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC027673.1-201ENST00000456245 405 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AL441985.1-201ENST00000457727 251 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 SRRM1P2-201ENST00000464531 1192 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC112206.3-201ENST00000514578 389 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 RN7SKP219-201ENST00000516825 296 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 SCARNA3-201ENST00000517097 143 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 RNU1-104P-201ENST00000517280 175 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 CYCSP39-201ENST00000565821 309 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AL451007.1-201ENST00000595491 289 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 AP000787.2-201ENST00000604432 568 ntBASIC2.7□□□□□ -1.98
NUP54Q7Z3B4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 423.9 ms