Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 RNA5SP384-201ENST00000516615 116 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 Y_RNA.708-201ENST00000516950 96 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 Y_RNA.720-201ENST00000517166 92 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 RNU6-988P-201ENST00000519081 107 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC087854.1-201ENST00000519706 414 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC026371.1-201ENST00000551867 419 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 MIR4738-201ENST00000579134 87 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 LRRC37A5P-203ENST00000580181 585 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 MIR3671-201ENST00000580455 88 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC006130.2-201ENST00000586202 326 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC011494.1-201ENST00000596454 237 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC006077.1-201ENST00000604746 343 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 ELOCP5-201ENST00000604924 333 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AL161423.1-201ENST00000613700 262 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 ATP5A1P2-202ENST00000616464 443 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC091925.1-201ENST00000623204 462 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 OR4G2P-202ENST00000641004 1759 ntBASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.12□□□□□ -1.91
COLCA1Q6ZS62 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 UBE2L2-201ENST00000254302 429 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 SNORD62.1-201ENST00000362541 86 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 MIR568-201ENST00000385036 95 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RNU6ATAC-201ENST00000408749 126 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 Y_RNA.605-201ENST00000410577 105 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RNU6-607P-201ENST00000411283 108 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC063979.1-201ENST00000415539 377 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC243428.1-201ENST00000421099 264 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC002075.2-201ENST00000425207 252 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC236972.1-201ENST00000433225 199 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC007389.2-201ENST00000434630 306 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 IPO7P1-201ENST00000442031 636 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RNU7-187P-201ENST00000458985 68 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC087588.1-201ENST00000462203 316 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AL049874.1-201ENST00000489560 388 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC026801.1-201ENST00000497178 464 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RNU1-86P-201ENST00000516108 154 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 RNU1-107P-201ENST00000516617 154 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AL031601.2-202ENST00000622650 282 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC138627.2-201ENST00000624202 601 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 Z99571.1-201ENST00000636677 394 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 AC007656.2-201ENST00000624902 4547 ntBASIC3.11□□□□□ -1.91
COLCA1Q6ZS62 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU5A-1-201ENST00000362698 116 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU6-1309P-201ENST00000363305 108 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU6-512P-201ENST00000364438 103 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 Y_RNA.252-201ENST00000364556 101 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU6-1032P-201ENST00000384100 107 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU6-842P-201ENST00000384269 107 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RNU6-331P-201ENST00000384724 107 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 SNORD73A-201ENST00000386062 65 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 MIR548F4-201ENST00000408515 105 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 Z99755.1-201ENST00000414048 380 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AL353621.1-201ENST00000418219 243 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RPS29P31-201ENST00000446147 164 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RPS3AP46-201ENST00000448352 682 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 SNORD105B-201ENST00000458770 79 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RPL37P6-201ENST00000460682 294 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RN7SL542P-201ENST00000467147 294 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC084357.1-201ENST00000473404 255 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 RPS26P21-201ENST00000475397 348 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC092185.1-201ENST00000491371 97 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 VN1R104P-201ENST00000505115 1009 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC096745.1-201ENST00000509945 370 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 SNORD84-203ENST00000584275 78 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC098826.3-201ENST00000603823 466 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AL161798.1-201ENST00000604630 131 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC106900.2-201ENST00000604994 317 ntBASIC3.1□□□□□ -1.91
COLCA1Q6ZS62 AC008962.1-201ENST00000605729 304 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms