Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 MIR4298-201ENST00000584380 73 ntBASIC2.8□□□□□ -1.96
CTR9Q6PD62 AC107294.1-201ENST00000609524 467 ntBASIC2.8□□□□□ -1.96
CTR9Q6PD62 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CTR9Q6PD62 Z99129.1-201ENST00000612510 255 ntBASIC2.8□□□□□ -1.96
CTR9Q6PD62 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CTR9Q6PD62 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.8□□□□□ -1.96
CTR9Q6PD62 AC010680.1-201ENST00000590024 3590 ntBASIC2.8□□□□□ -1.96
CTR9Q6PD62 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CTR9Q6PD62 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTR9Q6PD62 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CTR9Q6PD62 RNU6-181P-201ENST00000363225 107 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 OR5H15-201ENST00000383696 930 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RNU6-74P-201ENST00000384235 107 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 Y_RNA.559-201ENST00000384686 107 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CTR9Q6PD62 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 MTATP6P16-201ENST00000434543 526 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 SNRPEP9-201ENST00000436794 238 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 RPL32P28-201ENST00000443577 397 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RPL39P36-201ENST00000490784 156 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC138853.1-201ENST00000503549 823 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RN7SKP298-201ENST00000515950 94 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RNA5SP24-201ENST00000516478 95 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RNA5SP281-201ENST00000516504 135 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 RNU6-445P-201ENST00000516949 107 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 AGGF1P4-201ENST00000568249 801 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC004805.2-201ENST00000605382 482 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC130324.3-201ENST00000614165 542 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 AC136475.10-201ENST00000620253 385 ntBASIC2.79□□□□□ -1.96
CTR9Q6PD62 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.79□□□□□ -1.96
CTR9Q6PD62 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTR9Q6PD62 MTND5P29-201ENST00000458676 1807 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU6-108P-201ENST00000365558 107 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU6-198P-201ENST00000384258 104 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 SNORA24.1-201ENST00000384401 135 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 Y_RNA.534-201ENST00000384599 112 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU2-39P-201ENST00000410604 198 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU2-66P-201ENST00000410650 161 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 MTND1P23-201ENST00000416931 372 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 Z98742.3-201ENST00000418637 326 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AL592045.1-201ENST00000429867 352 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 MTCO2P11-201ENST00000431069 680 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 GPR143P-201ENST00000434155 205 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC132479.1-201ENST00000449160 144 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 C1DP4-201ENST00000455429 424 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 MTND2P33-201ENST00000506452 1031 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC091133.4-201ENST00000511142 308 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU1-41P-201ENST00000516161 162 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNU1-48P-201ENST00000516400 162 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 RNA5SP165-201ENST00000517142 115 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AL391261.3-201ENST00000557194 520 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC009063.1-201ENST00000563342 702 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AL391840.1-201ENST00000571144 367 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC098848.2-201ENST00000588023 330 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC068790.2-201ENST00000602601 557 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC174048.1-201ENST00000603389 144 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC073648.5-201ENST00000603502 305 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 NDUFA8P1-201ENST00000605525 367 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC022893.3-201ENST00000607665 437 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC011939.3-201ENST00000613686 466 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC093648.1-201ENST00000623546 606 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 AC073308.1-201ENST00000623696 305 ntBASIC2.78□□□□□ -1.96
CTR9Q6PD62 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CTR9Q6PD62 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTR9Q6PD62 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.77□□□□□ -1.97
CTR9Q6PD62 MTND5P6-201ENST00000422338 1798 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 Y_RNA.367-201ENST00000365544 101 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CTR9Q6PD62 RNU6-641P-201ENST00000384006 107 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 Y_RNA.582-201ENST00000391023 95 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 RNU2-16P-201ENST00000410712 136 ntBASIC2.77□□□□□ -1.97
CTR9Q6PD62 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.77□□□□□ -1.97
CTR9Q6PD62 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.77□□□□□ -1.97
CTR9Q6PD62 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.77□□□□□ -1.97
CTR9Q6PD62 AC010975.2-201ENST00000427781 588 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms