Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR5690-201ENST00000583739 73 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 XIAPP1-201ENST00000603162 600 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 uc_338.25-201ENST00000613756 156 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC015967.1-201ENST00000619893 476 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 KPNA2P1-201ENST00000458289 1591 ntBASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF549Q6P9A3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
ZNF549Q6P9A3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 SNORA31-201ENST00000362607 130 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 RNA5SP189-201ENST00000364920 115 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.459-201ENST00000384251 102 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 RNU6-882P-201ENST00000391025 103 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AL139039.1-201ENST00000401900 692 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 IPO7P1-201ENST00000442031 636 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 PRDX3P3-201ENST00000447765 522 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 FABP5P13-201ENST00000452144 328 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 MTND5P22-201ENST00000458380 195 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 RN7SKP258-201ENST00000517151 304 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 OR4H12P-201ENST00000556269 907 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 SNRPGP15-201ENST00000600149 222 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 U2.17-201ENST00000611454 95 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AC084757.4-201ENST00000616350 526 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AC010205.1-201ENST00000616668 449 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 MIR7975-201ENST00000619350 68 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AC012314.7-201ENST00000619693 93 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AL669831.3-213ENST00000636676 183 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 MTND5P30-201ENST00000452896 1731 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 MTND4P1-201ENST00000457501 1466 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 AL353746.1-201ENST00000566293 6881 ntBASIC3.15□□□□□ -1.91
ZNF549Q6P9A3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-562P-201ENST00000362731 107 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-371P-201ENST00000364283 108 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-593P-201ENST00000364716 112 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-463P-201ENST00000384340 107 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-434P-201ENST00000384376 107 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 MIR568-201ENST00000385036 95 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU6-837P-201ENST00000391056 108 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL356057.3-201ENST00000402607 340 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 ARF4P2-201ENST00000430209 526 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL591704.1-201ENST00000432574 275 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 SNAP23P1-201ENST00000433229 246 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RPS12P18-201ENST00000442381 270 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 PRSS3P4-201ENST00000453323 162 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 MIR2053-201ENST00000459295 91 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC104472.2-201ENST00000469035 601 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RN7SL330P-201ENST00000469709 307 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RPL7P49-201ENST00000471402 708 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL135752.1-201ENST00000479477 471 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC026782.1-201ENST00000512952 449 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RNU2-58P-201ENST00000516403 183 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.720-201ENST00000517166 92 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 RN7SKP295-201ENST00000517264 153 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL355836.1-201ENST00000555951 870 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC106782.4-201ENST00000568264 210 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 MIR3941-201ENST00000582572 103 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC104763.2-201ENST00000604179 382 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL158032.1-201ENST00000605401 106 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL121655.1-201ENST00000605811 308 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AL359547.2-201ENST00000615810 418 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 AC022418.1-201ENST00000624118 445 ntBASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
ZNF549Q6P9A3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 AL355596.1-201ENST00000565399 3996 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 SNORA63.1-201ENST00000362493 131 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 U3.6-201ENST00000363622 211 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-335P-201ENST00000364563 113 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 RNU6-1040P-201ENST00000383974 107 ntBASIC3.13□□□□□ -1.91
ZNF549Q6P9A3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms