Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
USPL1Q5W0Q7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.84□□□□□ -1.64
USPL1Q5W0Q7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
USPL1Q5W0Q7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AL359693.1-201ENST00000614959 2407 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MFSD8-236ENST00000641509 4050 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 OR56A5-201ENST00000340110 738 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 RNU6-384P-201ENST00000364900 104 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1181P-201ENST00000384191 106 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR490-201ENST00000384865 128 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR199A2-201ENST00000385289 110 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 Z92545.1-201ENST00000411782 234 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 SNORD56-201ENST00000413522 71 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 EI24P1-201ENST00000416584 867 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AL590383.1-201ENST00000428602 75 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 FCF1P4-201ENST00000448326 183 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 RNU6-388P-201ENST00000517012 105 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 RNU6-389P-201ENST00000517048 105 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR5696-201ENST00000578474 85 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR5701-3-201ENST00000578890 82 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR5701-1-201ENST00000585138 82 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AC125232.2-201ENST00000592457 143 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 SNRPGP15-201ENST00000600149 222 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 HMGB1P50-201ENST00000605814 607 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR8076-201ENST00000611401 83 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 MIR5701-2-201ENST00000615634 82 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 AC027290.2-201ENST00000623210 18662 ntBASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
USPL1Q5W0Q7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.48-201ENST00000362710 103 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 SNORD14B-201ENST00000364533 90 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1317P-201ENST00000364582 104 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.396-201ENST00000383949 103 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 MIR1302-6-201ENST00000408466 90 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.623-201ENST00000411128 95 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AL592148.1-201ENST00000413568 445 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC092573.2-201ENST00000434546 243 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 BX510359.1-201ENST00000456973 237 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC010469.1-201ENST00000463864 576 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC010285.1-201ENST00000470580 392 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 RPL7P5-201ENST00000471472 736 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 HMGB1P22-201ENST00000505315 124 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 RNA5SP291-201ENST00000517222 105 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 IGHV3-76-201ENST00000522465 295 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC007458.1-201ENST00000542812 373 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 MED28P6-201ENST00000558776 231 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 AC009314.1-201ENST00000603871 304 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 MTND4LP5-201ENST00000605152 292 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
USPL1Q5W0Q7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 ZNF962P-201ENST00000443465 3140 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-37P-201ENST00000362692 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-595P-201ENST00000363944 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-11P-201ENST00000364234 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-7-201ENST00000364784 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNA5SP267-201ENST00000364893 126 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-8-201ENST00000365467 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-25P-201ENST00000383873 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-741P-201ENST00000383889 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1-201ENST00000383898 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-1279P-201ENST00000383917 103 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-48P-201ENST00000384161 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-36P-201ENST00000384172 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.447-201ENST00000384184 113 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-4P-201ENST00000384205 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-5P-201ENST00000384238 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.461-201ENST00000384263 103 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-3P-201ENST00000384314 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 RNU6-16P-201ENST00000384385 107 ntBASIC4.81□□□□□ -1.64
USPL1Q5W0Q7 Y_RNA.512-201ENST00000384518 102 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms