Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.86
RNF220Q5VTB9 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNA5SP383-201ENST00000362934 120 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 SNORD116-11-201ENST00000383882 92 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNU6-1027P-201ENST00000383998 107 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 SNORD73A-201ENST00000386062 65 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AL031274.1-201ENST00000450334 232 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 MRPL42P6-201ENST00000486397 371 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AC092436.3-201ENST00000511788 257 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNU6-377P-201ENST00000515965 102 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 SNORA43.2-201ENST00000516652 128 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNU6-566P-201ENST00000516790 107 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 MIR5187-201ENST00000583479 76 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 uc_338.15-201ENST00000615470 191 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 MIR6875-201ENST00000617506 72 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AC022149.2-201ENST00000621061 203 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 U4.7-201ENST00000638126 106 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AL732372.2-225ENST00000642124 456 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
RNF220Q5VTB9 AC068647.1-201ENST00000489539 2265 ntBASIC3.4□□□□□ -1.87
RNF220Q5VTB9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RNU6-562P-201ENST00000362731 107 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RNU6-78P-201ENST00000362897 107 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.135-201ENST00000363439 95 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RNU6-19P-201ENST00000384718 107 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 FTH1P15-201ENST00000406984 280 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RNU6-628P-201ENST00000410675 107 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 NCOR1P3-201ENST00000420479 303 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 SNAP23P1-201ENST00000433229 246 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 HMGB1P18-201ENST00000438801 619 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC093019.1-201ENST00000443135 252 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC103851.1-201ENST00000506833 274 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC008526.1-201ENST00000509149 338 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 ACA59.2-201ENST00000517061 156 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF220Q5VTB9 OR8R1P-201ENST00000543943 764 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 CR383656.8-201ENST00000549046 145 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 PARP1P2-201ENST00000556806 195 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RN7SL703P-201ENST00000578485 302 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC138761.3-201ENST00000579993 334 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC243960.4-201ENST00000600532 288 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AL355877.2-201ENST00000603670 358 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC091152.3-201ENST00000604227 325 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AL133216.2-202ENST00000634512 349 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 AC110079.1-202ENST00000635213 138 ntBASIC3.39□□□□□ -1.87
RNF220Q5VTB9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 RNU6-858P-201ENST00000362436 107 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 DYNLT3P1-201ENST00000378574 347 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AL445529.1-201ENST00000398713 389 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AL356432.1-201ENST00000405809 419 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AL139396.1-201ENST00000421137 167 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 PTGES3P4-201ENST00000426243 356 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AMD1P1-201ENST00000457220 922 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AL133162.1-201ENST00000463228 453 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 RN7SL385P-201ENST00000468873 276 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC021205.2-201ENST00000480069 347 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 MTCO1P29-201ENST00000496868 288 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.682-201ENST00000516457 100 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 RNA5SP454-201ENST00000517231 127 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 ELOCP5-201ENST00000604924 333 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 Y_RNA.804-201ENST00000615262 101 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 TPTEP1-208ENST00000636884 213 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AL021368.2-201ENST00000606125 5352 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 AC007823.1-201ENST00000569932 1566 ntBASIC3.38□□□□□ -1.87
RNF220Q5VTB9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RNF220Q5VTB9 MAPK10-362ENST00000641864 4484 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms