Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AL162730.1-201ENST00000605734 292 ntBASIC0.23□□□□□ -2.37
LRRK2Q5S007 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.23□□□□□ -2.37
LRRK2Q5S007 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
LRRK2Q5S007 SNORA8-201ENST00000384574 139 ntBASIC0.23□□□□□ -2.37
LRRK2Q5S007 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 BX248409.1-201ENST00000455497 255 ntBASIC0.23□□□□□ -2.37
LRRK2Q5S007 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRK2Q5S007 AP003400.5-201ENST00000624827 617 ntBASIC0.23□□□□□ -2.37
LRRK2Q5S007 AL356421.1-201ENST00000403255 413 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 RNU6-575P-201ENST00000411326 105 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 MICF-203ENST00000432679 129 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AL049830.1-201ENST00000468034 425 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AF213884.2-201ENST00000510417 903 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC108157.1-201ENST00000510511 539 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 SCARNA16.2-201ENST00000516520 172 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 BNIP3P16-201ENST00000589779 534 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC069304.3-201ENST00000603938 1084 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
LRRK2Q5S007 MTND5P32-201ENST00000560711 1802 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 SNORA68.1-201ENST00000364537 132 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 RNU1-36P-201ENST00000365130 165 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AL589655.1-201ENST00000405398 482 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC098614.2-201ENST00000426040 255 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 RPEP5-201ENST00000441137 268 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC107953.1-201ENST00000522216 297 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC100812.1-201ENST00000607622 580 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC019131.2-201ENST00000609071 870 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 FRG1HP-204ENST00000617940 757 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
LRRK2Q5S007 AC099654.5-201ENST00000636479 350 ntBASIC0.22□□□□□ -2.37
LRRK2Q5S007 HSBP1P2-201ENST00000299671 229 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC098592.2-201ENST00000413158 265 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 RPL22P18-201ENST00000417197 377 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC0.21□□□□□ -2.38
LRRK2Q5S007 EIF4EP4-201ENST00000424916 578 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AL121578.1-201ENST00000428051 892 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC114982.1-201ENST00000469402 321 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
LRRK2Q5S007 MIR4667-201ENST00000578933 66 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 MIR4764-201ENST00000580680 88 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AL117342.1-201ENST00000404861 406 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 RNU6-1328P-201ENST00000410938 106 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC092393.1-201ENST00000439625 742 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AL157398.1-201ENST00000452981 186 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC087897.1-201ENST00000550134 156 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC092474.3-201ENST00000603022 568 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 HSPE1P19-201ENST00000603327 295 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 uc_338.34-201ENST00000617467 174 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 AC073349.3-201ENST00000617616 186 ntBASIC0.21□□□□□ -2.38
LRRK2Q5S007 SNORD114-28-201ENST00000363610 72 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 SNORA32.3-201ENST00000384772 121 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 GTF2IP13-201ENST00000438487 386 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.2□□□□□ -2.38
LRRK2Q5S007 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.2□□□□□ -2.38
LRRK2Q5S007 COX6CP6-201ENST00000490840 228 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 AL133373.1-201ENST00000497098 94 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.2□□□□□ -2.38
LRRK2Q5S007 AC113194.1-201ENST00000606037 500 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 MIR7157-201ENST00000635801 60 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 AP003399.1-201ENST00000637534 361 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 MIR618-201ENST00000385287 98 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 RPS3AP1-201ENST00000413190 320 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.2□□□□□ -2.38
LRRK2Q5S007 OR5AK1P-201ENST00000524837 922 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 NIFKP6-201ENST00000598115 845 ntBASIC0.2□□□□□ -2.38
LRRK2Q5S007 Y_RNA.475-201ENST00000384345 101 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AL589880.1-201ENST00000448271 287 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 RNU7-40P-201ENST00000516397 64 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 RNU6-943P-201ENST00000516960 98 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 OR1M4P-201ENST00000589199 287 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 RNU1-124P-201ENST00000363861 145 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC099677.1-201ENST00000420575 175 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 SNORA31.8-201ENST00000516327 108 ntBASIC0.19□□□□□ -2.38
LRRK2Q5S007 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.19□□□□□ -2.38
LRRK2Q5S007 AC073410.2-201ENST00000603240 332 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms