Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 TOMM20P4-201ENST00000427861 435 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 UQCRHP3-201ENST00000451503 251 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 MTND3P16-201ENST00000452205 344 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC092001.1-201ENST00000453012 261 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AL590639.1-201ENST00000456484 337 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6-333P-201ENST00000459117 107 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU7-167P-201ENST00000459160 62 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC008155.2-201ENST00000464337 397 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 MTCO3P38-201ENST00000468910 766 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RN7SL601P-201ENST00000471221 293 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RN7SL499P-201ENST00000481141 276 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC116655.1-201ENST00000508324 901 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 RNU6-581P-201ENST00000516214 105 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC005261.5-201ENST00000596280 355 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC38Q502W7 Z82243.1-201ENST00000609432 473 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC38Q502W7 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 U6atac.1-201ENST00000616025 117 ntBASIC3.31□□□□□ -1.88
CCDC38Q502W7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC38Q502W7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC004944.1-201ENST00000517807 3059 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC38Q502W7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC004520.1-201ENST00000608362 1413 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 RNU6-82P-201ENST00000363970 107 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RNA5SP72-201ENST00000364442 117 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 Y_RNA.453-201ENST00000384223 109 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RAP1BP3-201ENST00000407180 549 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 ARL5AP1-201ENST00000418991 388 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 SNRPEP10-201ENST00000420249 274 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 RPL21P10-201ENST00000463521 490 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RPL31P41-201ENST00000477967 372 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RN7SL293P-201ENST00000481765 281 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CCDC38Q502W7 RNU6-718P-201ENST00000516166 105 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC38Q502W7 MTCO3P13-201ENST00000577757 781 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 RPL23AP78-201ENST00000599928 470 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 AC091152.3-201ENST00000604227 325 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 AL355365.1-201ENST00000616480 294 ntBASIC3.3□□□□□ -1.88
CCDC38Q502W7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC38Q502W7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC38Q502W7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 RNU6-451P-201ENST00000362921 107 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 Y_RNA.89-201ENST00000363031 102 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 RNU6-1303P-201ENST00000364841 107 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 RNU1-100P-201ENST00000365255 165 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 RNU4-20P-201ENST00000365601 151 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC38Q502W7 MIR514A2-201ENST00000385131 88 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 MIR514A3-201ENST00000385132 88 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL122016.1-201ENST00000403365 367 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 BX682237.1-201ENST00000415016 335 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 ATG3P1-201ENST00000419507 911 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 PGBD4P6-201ENST00000421501 610 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL139281.1-201ENST00000422120 335 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 RPL23AP83-201ENST00000434984 473 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL121601.2-201ENST00000438019 707 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 RPL23AP58-201ENST00000440453 469 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 OSTCP8-201ENST00000445117 448 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 CENPUP1-201ENST00000526649 1202 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC38Q502W7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL391813.1-201ENST00000603098 260 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AL157817.1-201ENST00000614264 790 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.29□□□□□ -1.88
CCDC38Q502W7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms