Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SL489P-201ENST00000486185 223 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RN7SL327P-201ENST00000488659 223 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 OR9N1P-202ENST00000494289 481 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.73□□□□□ -2.29
CCDC58Q4VC31 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.73□□□□□ -2.29
CCDC58Q4VC31 RN7SL853P-201ENST00000617250 223 ntBASIC0.73□□□□□ -2.29
CCDC58Q4VC31 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 SRIP3-201ENST00000413200 219 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 HSPE1P13-201ENST00000451143 297 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AC092001.1-201ENST00000453012 261 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 CECR9-201ENST00000453421 199 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 snoU13.23-201ENST00000458863 104 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC58Q4VC31 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AC109329.1-201ENST00000518744 317 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AL731537.2-201ENST00000561565 951 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 CYP3A52P-201ENST00000563326 91 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 MIR3937-201ENST00000580135 106 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 CLIC4P2-201ENST00000601934 717 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AL118556.2-201ENST00000614375 824 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AC106800.4-201ENST00000614905 153 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AC107905.1-201ENST00000616204 426 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 MIR8065-201ENST00000620577 100 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 AL136313.1-201ENST00000624804 202 ntBASIC0.72□□□□□ -2.29
CCDC58Q4VC31 RNU6-582P-201ENST00000362989 107 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU6-657P-201ENST00000383904 107 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU6-658P-201ENST00000384606 106 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU2-68P-201ENST00000410878 191 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU2-64P-201ENST00000411315 191 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AL365400.1-201ENST00000431854 640 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 MTCO3P5-201ENST00000433620 714 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RPS3AP22-201ENST00000488297 769 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU6-581P-201ENST00000516214 105 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 RNU6-678P-201ENST00000516832 109 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC019176.1-201ENST00000518519 225 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AL132822.1-201ENST00000617063 513 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
CCDC58Q4VC31 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC58Q4VC31 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC58Q4VC31 MIR378A-201ENST00000362177 66 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 MIR764-201ENST00000390811 85 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 TMSB4XP8-201ENST00000402089 135 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 TMSB4XP6-201ENST00000415187 135 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 EIF1P1-201ENST00000421436 341 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 TMSB4XP1-201ENST00000424567 135 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AC108078.1-201ENST00000508073 725 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC58Q4VC31 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC58Q4VC31 MRPS36P5-201ENST00000551909 298 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 SUB1P4-201ENST00000566062 339 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AC023824.3-201ENST00000569003 562 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AP000860.1-201ENST00000605250 559 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 AL590396.4-201ENST00000636779 956 ntBASIC0.7□□□□□ -2.3
CCDC58Q4VC31 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.7□□□□□ -2.3
CCDC58Q4VC31 DBF4P1-201ENST00000412976 1892 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 SNORA27.3-201ENST00000364937 134 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 RNU6-40P-201ENST00000384254 107 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 5S_rRNA.2-201ENST00000391293 112 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 RNU2-32P-201ENST00000411193 191 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 JTBP1-201ENST00000441314 247 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 MTND3P4-201ENST00000453537 303 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC108210.2-201ENST00000503681 201 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 RNU6-703P-201ENST00000516946 107 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 RNA5SP135-201ENST00000517019 125 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 CBX3P8-201ENST00000532412 525 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC090502.2-201ENST00000549267 280 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AP005136.1-201ENST00000579765 429 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC58Q4VC31 RPL30P11-203ENST00000598995 310 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC011451.2-201ENST00000604303 598 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AC008945.2-201ENST00000606056 604 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AL583856.2-201ENST00000606298 543 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 AL353997.5-201ENST00000618886 171 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 DDX43P2-201ENST00000604753 1354 ntBASIC0.69□□□□□ -2.3
CCDC58Q4VC31 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CCDC58Q4VC31 RNU11-5P-201ENST00000391216 129 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 AL136133.1-201ENST00000413694 376 ntBASIC0.68□□□□□ -2.3
CCDC58Q4VC31 RAC1P8-201ENST00000427086 527 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms