Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AL160281.1-201ENST00000605307 311 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-6P-201ENST00000606623 107 ntBASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC144BQ3MJ40 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 MAPK10-373ENST00000641983 6772 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC138393.1-203ENST00000327086 343 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 SNORD9-201ENST00000362566 104 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 Y_RNA.135-201ENST00000363439 95 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-1280P-201ENST00000365211 107 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 RNU5E-7P-201ENST00000365290 117 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AL360182.1-201ENST00000397433 468 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC005300.1-201ENST00000428401 373 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 RPS15AP5-201ENST00000436276 388 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 HIGD1AP11-201ENST00000438361 280 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 MRPL50P4-201ENST00000446432 475 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 snoU109.2-201ENST00000459316 135 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC008526.1-201ENST00000509149 338 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 FGF7P4-201ENST00000509595 295 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 RNA5SP454-201ENST00000517231 127 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 COPS8P3-201ENST00000526024 482 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 MIR8058-201ENST00000615737 89 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 AC032011.1-201ENST00000611703 1549 ntBASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
CCDC144BQ3MJ40 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-1329P-201ENST00000365664 107 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 MIR184-201ENST00000384962 84 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 SNORD56-201ENST00000413522 71 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC016831.2-201ENST00000417179 352 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 CYCSP4-201ENST00000429682 331 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC097713.2-201ENST00000430199 356 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AL136097.1-201ENST00000456945 913 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC026784.1-201ENST00000507986 352 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC096745.1-201ENST00000509945 370 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-273P-201ENST00000516937 96 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 SNORD19.2-201ENST00000516978 73 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-1231P-201ENST00000517185 103 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC138761.3-201ENST00000579993 334 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 RMST_8.1-201ENST00000610287 165 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 RMST_7.1-201ENST00000621935 268 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC008669.1-201ENST00000565823 2178 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 AC007823.1-201ENST00000569932 1566 ntBASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC144BQ3MJ40 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 RNA5SP267-201ENST00000364893 126 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 RNU1-101P-201ENST00000391171 127 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC074085.1-201ENST00000413598 418 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AL645568.3-201ENST00000433683 316 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC107399.1-201ENST00000451226 265 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 RPL23AP45-201ENST00000476406 468 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-1088P-201ENST00000516850 104 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 NDUFB9P3-201ENST00000521269 501 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC006199.1-201ENST00000548728 219 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC025281.1-201ENST00000567026 265 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC024153.1-201ENST00000603103 365 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AC104985.2-201ENST00000620598 500 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 AL049781.1-201ENST00000623195 3585 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.17□□□□□ -1.74
CCDC144BQ3MJ40 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RNA5SP50-201ENST00000363731 107 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 Y_RNA.356-201ENST00000365475 113 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 AL078595.1-201ENST00000404458 226 ntBASIC4.16□□□□□ -1.74
CCDC144BQ3MJ40 RNU6-293P-201ENST00000411259 106 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms