Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 PSMA3P-201ENST00000555485 635 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 TRAV28-201ENST00000557548 323 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AC008521.1-201ENST00000587471 187 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AC174048.1-201ENST00000603389 144 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 YPEL5P2-201ENST00000605553 359 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 SDR42E1P2-201ENST00000614861 481 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AL589994.2-201ENST00000621124 579 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 AC090617.7-201ENST00000623952 126 ntBASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.59□□□□□ -1.99
SNAI3Q3KNW1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SNAI3Q3KNW1 MTND4P29-201ENST00000503122 1372 ntBASIC2.59□□□□□ -2
SNAI3Q3KNW1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SNAI3Q3KNW1 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.59□□□□□ -2
SNAI3Q3KNW1 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SNAI3Q3KNW1 AC092435.3-201ENST00000565538 3654 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 RNA5SP374-201ENST00000362939 125 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 SNORA38.1-201ENST00000364172 131 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 SNORD37.1-201ENST00000390968 65 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AL606923.1-201ENST00000406616 190 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 OR6C66P-201ENST00000414917 930 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPL7P37-201ENST00000425095 738 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPL35AP12-201ENST00000425362 338 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC009296.1-201ENST00000443146 155 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC020550.1-201ENST00000447385 163 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 SNRPFP3-201ENST00000457792 225 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPS29P2-201ENST00000479278 136 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPL21P99-201ENST00000480369 423 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RN7SL499P-201ENST00000481141 276 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPS27P26-201ENST00000494583 239 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC117522.3-201ENST00000507974 584 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RBBP4P6-201ENST00000508098 202 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 FGF7P4-201ENST00000509595 295 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC112206.3-201ENST00000514578 389 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 SNORA31.3-201ENST00000516029 96 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 RN7SKP258-201ENST00000517151 304 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC107953.1-201ENST00000522216 297 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 RPS3AP23-202ENST00000574601 686 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC020895.1-201ENST00000595362 272 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 VN1R80P-201ENST00000597126 338 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC024220.1-201ENST00000603675 484 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC021646.1-201ENST00000605469 484 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AL365204.3-201ENST00000612448 685 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC004852.3-201ENST00000614131 326 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC009248.2-201ENST00000619826 254 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 MTND5P19-201ENST00000424872 1794 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 MTND4P35-201ENST00000604257 1375 ntBASIC2.58□□□□□ -2
SNAI3Q3KNW1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SNAI3Q3KNW1 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
SNAI3Q3KNW1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU6-522P-201ENST00000364497 107 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 U3.12-201ENST00000364498 214 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 Y_RNA.813-201ENST00000364639 102 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU4-66P-201ENST00000365199 138 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 Y_RNA.509-201ENST00000384506 99 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 Y_RNA.529-201ENST00000384586 119 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU6-510P-201ENST00000391239 108 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AL356432.1-201ENST00000405809 419 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RN7SKP32-201ENST00000410167 303 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RNU4-26P-201ENST00000410270 107 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RN7SKP220-201ENST00000410611 288 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC009161.1-201ENST00000417306 376 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AL451054.2-201ENST00000420896 202 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC092047.1-201ENST00000424997 240 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC009414.1-201ENST00000427200 443 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 IFNA20P-201ENST00000436840 528 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 RPL7P12-201ENST00000446719 750 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AP004217.1-201ENST00000480579 346 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 Y_RNA.665-201ENST00000516177 98 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC009812.2-201ENST00000517657 457 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AL137161.1-201ENST00000532231 390 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC243972.3-201ENST00000539655 198 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.57□□□□□ -2
SNAI3Q3KNW1 AL118558.2-201ENST00000556294 238 ntBASIC2.57□□□□□ -2
SNAI3Q3KNW1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms