Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 MTND2P18-201ENST00000419962 1030 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 ELOCP4-201ENST00000420090 333 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.99□□□□□ -2.09
RFX4Q33E94 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.99□□□□□ -2.09
RFX4Q33E94 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 MYL8P-204ENST00000431574 518 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.99□□□□□ -2.09
RFX4Q33E94 AL591704.1-201ENST00000432574 275 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 RPS27AP8-201ENST00000452665 445 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 RPL23AP49-201ENST00000492925 468 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC022493.1-201ENST00000492984 337 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.99□□□□□ -2.09
RFX4Q33E94 AC114781.4-201ENST00000513707 639 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC119751.5-201ENST00000514077 770 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AP005902.1-201ENST00000521358 186 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.99□□□□□ -2.09
RFX4Q33E94 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.99□□□□□ -2.09
RFX4Q33E94 NACAP3-201ENST00000552100 481 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
RFX4Q33E94 MIR3167-201ENST00000579623 85 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC005771.1-201ENST00000585581 349 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AF131215.7-201ENST00000602443 707 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC091152.3-201ENST00000604227 325 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC025034.2-201ENST00000623264 286 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 AC091931.1-201ENST00000623488 728 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 MIR3199-2-201ENST00000636243 86 ntBASIC1.99□□□□□ -2.09
RFX4Q33E94 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
RFX4Q33E94 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.98□□□□□ -2.09
RFX4Q33E94 KPNA2P1-201ENST00000458289 1591 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX4Q33E94 Y_RNA.111-201ENST00000363248 100 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 Y_RNA.510-201ENST00000384511 114 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 MIR558-201ENST00000384920 94 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 MRPL42P2-201ENST00000403169 426 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RNU6-195P-201ENST00000411352 109 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RPS3AP3-201ENST00000411933 242 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 HMGN1P14-201ENST00000412459 517 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AL031779.1-201ENST00000415663 330 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 RPL23AP30-201ENST00000432419 501 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AL161651.1-201ENST00000440882 223 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 BRK1P2-201ENST00000442875 223 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 OSTCP8-201ENST00000445117 448 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 EEF1B2P7-201ENST00000451177 676 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC023141.11-201ENST00000508864 202 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 RNU6-581P-201ENST00000516214 105 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 SCARNA24.1-201ENST00000516465 137 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RNU6-572P-201ENST00000516724 80 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 RNU6-1315P-201ENST00000517187 99 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 AL121821.2-201ENST00000556081 394 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.98□□□□□ -2.09
RFX4Q33E94 BNIP3P8-201ENST00000597863 560 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC008121.1-201ENST00000603244 268 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC011939.3-201ENST00000613686 466 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC025048.6-202ENST00000627667 438 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 AC243829.7-201ENST00000633081 225 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 U6.99-201ENST00000637524 83 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
RFX4Q33E94 AC004520.1-201ENST00000608362 1413 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 ADAM3A-203ENST00000461344 2157 ntBASIC1.98□□□□□ -2.09
RFX4Q33E94 SNORA16B-201ENST00000364674 135 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 MIR518D-201ENST00000385014 87 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.97□□□□□ -2.09
RFX4Q33E94 RPS3AP36-201ENST00000398190 775 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 RNU2-40P-201ENST00000410833 196 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AL109913.1-201ENST00000421173 514 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 AC236972.1-201ENST00000433225 199 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC009961.2-201ENST00000435771 251 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 KLF3P2-201ENST00000465138 268 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 FAM92A1P2-202ENST00000504766 877 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC098862.1-201ENST00000504991 413 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 AC022447.1-201ENST00000515358 464 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 RNA5SP281-201ENST00000516504 135 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 MIR514B-201ENST00000516774 80 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 SNORA31.19-201ENST00000517079 126 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.97□□□□□ -2.09
RFX4Q33E94 AC007151.1-201ENST00000572774 483 ntBASIC1.97□□□□□ -2.09
RFX4Q33E94 MIR5571-201ENST00000577998 113 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms