Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AL022238.1-201ENST00000442557 355 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 snoU13.23-201ENST00000458863 104 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC090096.1-201ENST00000489168 390 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 SNORA31.3-201ENST00000516029 96 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC015712.3-201ENST00000559380 164 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC121247.2-201ENST00000604776 136 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AC073114.1-201ENST00000612027 490 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 PISRT1-201ENST00000626175 531 ntBASIC2.55□□□□□ -2
SHROOM1Q2M3G4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
SHROOM1Q2M3G4 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SNORD116-8-201ENST00000384365 95 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 RPS3AP36-201ENST00000398190 775 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SNORA11.4-201ENST00000408823 129 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 RNU2-68P-201ENST00000410878 191 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC127391.1-201ENST00000411737 98 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AL139156.1-201ENST00000412785 841 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 MTND1P23-201ENST00000416931 372 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 ELOCP4-201ENST00000420090 333 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SKA2P1-201ENST00000425592 390 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 ISCA1P6-201ENST00000427740 390 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC104850.1-201ENST00000435940 476 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 FABP5P13-201ENST00000452144 328 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC093899.1-201ENST00000457984 376 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SNORD97-201ENST00000459187 142 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC080013.2-201ENST00000460866 323 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 RAP1BP2-201ENST00000478270 544 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC091965.2-201ENST00000512324 613 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 Y_RNA.672-201ENST00000516289 104 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 RNU6-1092P-201ENST00000516955 87 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC007151.1-201ENST00000572774 483 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC005771.1-201ENST00000585581 349 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC025165.5-201ENST00000602802 578 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AL358072.1-201ENST00000604156 575 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC068276.1-201ENST00000605793 379 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AC013562.2-201ENST00000611632 603 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AL133173.2-201ENST00000614270 90 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 AP003400.5-201ENST00000624827 617 ntBASIC2.54□□□□□ -2
SHROOM1Q2M3G4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
SHROOM1Q2M3G4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 RNU6-946P-201ENST00000383878 107 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 RNU5A-2P-201ENST00000384337 116 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 RPS3AP3-201ENST00000411933 242 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 RPS12P24-201ENST00000412619 387 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC114491.1-201ENST00000416095 246 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC098831.1-201ENST00000440661 216 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC098826.2-201ENST00000452011 651 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 MTND1P12-201ENST00000455231 147 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 RNU2-10P-201ENST00000516375 211 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AP005902.1-201ENST00000521358 186 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 OR5BN1P-201ENST00000532955 829 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 CYCSP26-201ENST00000534107 320 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC137800.2-201ENST00000574375 120 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.6-201ENST00000603753 252 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.11-201ENST00000604059 253 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC008162.1-201ENST00000604718 254 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.1-201ENST00000604752 252 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.5-201ENST00000605253 252 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.12-201ENST00000605291 253 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.8-201ENST00000605353 252 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL670379.7-201ENST00000605823 252 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC091304.9-201ENST00000612091 226 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 AL603839.4-201ENST00000624658 1005 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 Z99571.1-201ENST00000636677 394 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 MTND5P29-201ENST00000458676 1807 ntBASIC2.53□□□□□ -2
SHROOM1Q2M3G4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
SHROOM1Q2M3G4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AC004520.1-201ENST00000608362 1413 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 U8.3-201ENST00000363321 132 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 RNU6-658P-201ENST00000384606 106 ntBASIC2.52□□□□□ -2.01
SHROOM1Q2M3G4 HMGN1P14-201ENST00000412459 517 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms