Protein–RNA interactions for Protein: Q12947

FOXF2, Forkhead box protein F2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF2Q12947 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 UBE3AP2-201ENST00000429033 2259 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 LINC02471-203ENST00000641941 4752 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXF2Q12947 SNORA63.1-201ENST00000362493 131 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RNY3P11-201ENST00000364153 102 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RNU4-42P-201ENST00000364738 142 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RNU6-806P-201ENST00000365147 105 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RNU6-1329P-201ENST00000365664 107 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 Y_RNA.562-201ENST00000384695 113 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 MIR7-3-201ENST00000384898 110 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 SNORD73A-201ENST00000386062 65 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 AL138885.1-201ENST00000405921 675 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RPS29P4-201ENST00000414733 161 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 CRYBB2P1-203ENST00000415709 538 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.31□□□□□ -1.88
FOXF2Q12947 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXF2Q12947 AL590664.1-201ENST00000448065 339 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 SNRPGP5-201ENST00000456003 220 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RPL23AP31-201ENST00000456160 467 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RPL7P49-201ENST00000471402 708 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AC106707.2-201ENST00000484182 374 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AL049874.1-201ENST00000489560 388 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AC093852.1-201ENST00000503587 266 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 SUMO2P6-201ENST00000505273 288 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXF2Q12947 AC025465.3-201ENST00000510570 311 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 SNORA25.11-201ENST00000515935 105 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 Y_RNA.673-201ENST00000516306 88 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 SNRPGP16-201ENST00000533275 226 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXF2Q12947 RRN3P3-201ENST00000549207 578 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.31□□□□□ -1.88
FOXF2Q12947 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXF2Q12947 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.31□□□□□ -1.88
FOXF2Q12947 BDH2P1-201ENST00000602288 736 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 RAC1P9-201ENST00000604990 392 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 AL391261.4-201ENST00000616012 481 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 MIR4275-201ENST00000636486 87 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
FOXF2Q12947 AL356489.2-201ENST00000566968 3528 ntBASIC3.31□□□□□ -1.88
FOXF2Q12947 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
FOXF2Q12947 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
FOXF2Q12947 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FOXF2Q12947 MTND5P6-201ENST00000422338 1798 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF2Q12947 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF2Q12947 Y_RNA.48-201ENST00000362710 103 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 SNORD46.1-201ENST00000364139 104 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RNA5SP387-201ENST00000364226 106 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF2Q12947 Y_RNA.480-201ENST00000384364 102 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 Y_RNA.534-201ENST00000384599 112 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 Y_RNA.551-201ENST00000384661 102 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RNU6-1093P-201ENST00000391194 107 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
FOXF2Q12947 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AC063979.1-201ENST00000415539 377 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF2Q12947 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AL592045.1-201ENST00000429867 352 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC087650.1-201ENST00000431445 468 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AL133396.1-201ENST00000432048 687 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC073063.1-201ENST00000434352 607 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 USP9YP7-201ENST00000436723 430 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.3□□□□□ -1.88
FOXF2Q12947 RPS3AP46-201ENST00000448352 682 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 OR2AQ1P-201ENST00000451972 200 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 USP9YP32-201ENST00000452432 430 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 RPL37P6-201ENST00000460682 294 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RPL31P60-201ENST00000478450 367 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 FO393415.2-201ENST00000480085 343 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 HMGB1P35-201ENST00000503360 598 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF2Q12947 RNU6-138P-201ENST00000515952 107 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RN7SKP18-201ENST00000516005 275 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 SNORA40.15-201ENST00000516884 107 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RNA5SP471-201ENST00000516971 106 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RNU6-789P-201ENST00000517105 102 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC069113.1-201ENST00000517763 267 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 IGKV2D-23-201ENST00000518179 286 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.3□□□□□ -1.88
FOXF2Q12947 AC006600.1-201ENST00000572529 153 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 MIR3944-201ENST00000581277 108 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXF2Q12947 RNA5SP108-201ENST00000605921 117 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 RNU6-85P-201ENST00000605989 107 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 AC012314.7-201ENST00000619693 93 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.3□□□□□ -1.88
FOXF2Q12947 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.3□□□□□ -1.88
FOXF2Q12947 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
FOXF2Q12947 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms