Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AC012360.2-201ENST00000609349 391 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AL078604.3-201ENST00000615580 211 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AP003485.1-201ENST00000625093 753 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 AL590396.4-201ENST00000636779 956 ntBASIC0.78□□□□□ -2.28
HIST1H1AQ02539 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.78□□□□□ -2.28
HIST1H1AQ02539 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
HIST1H1AQ02539 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 RNU6-637P-201ENST00000384050 107 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 FGF7P8-201ENST00000402994 292 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AL133264.1-201ENST00000407157 562 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 SNRPEP10-201ENST00000420249 274 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC027119.1-201ENST00000440877 241 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC087477.1-201ENST00000465747 340 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AL163540.1-201ENST00000485382 386 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 MTCO3P42-201ENST00000509488 518 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 MTCO3P39-201ENST00000514812 518 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 SNORA31.17-201ENST00000516953 127 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 RNA5SP404-201ENST00000517118 132 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC109329.1-201ENST00000518744 317 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC012414.2-201ENST00000559474 187 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC104984.5-201ENST00000586878 94 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AP001542.2-201ENST00000593141 364 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC073544.2-201ENST00000601155 540 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC133794.1-201ENST00000602731 914 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AP000942.3-201ENST00000603702 160 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 SNORD114-21-201ENST00000606412 72 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC006213.5-201ENST00000619673 288 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 AC106730.3-201ENST00000624568 641 ntBASIC0.77□□□□□ -2.29
HIST1H1AQ02539 RNA5SP327-201ENST00000362494 101 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 RNU6-414P-201ENST00000363705 104 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 SNORD51.1-201ENST00000365405 77 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 RNU6-1032P-201ENST00000384100 107 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 MTND4P24-201ENST00000424002 397 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC092634.2-201ENST00000428146 1010 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AL022238.1-201ENST00000442557 355 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 PRPS1P1-201ENST00000445305 876 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC104058.1-201ENST00000448028 297 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 DUXAP8-207ENST00000456786 622 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 RPL30P12-201ENST00000474666 353 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 RNU6-927P-201ENST00000516199 100 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 ACA59.2-201ENST00000517061 156 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 SNORA77B-201ENST00000578179 125 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC091895.1-201ENST00000624494 256 ntBASIC0.76□□□□□ -2.29
HIST1H1AQ02539 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
HIST1H1AQ02539 AC138393.1-203ENST00000327086 343 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 SNORD1A-201ENST00000364968 72 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AL022400.1-201ENST00000423946 935 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 MTCO3P5-201ENST00000433620 714 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.75□□□□□ -2.29
HIST1H1AQ02539 OFD1P3Y-201ENST00000453312 783 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AC010460.2-201ENST00000509054 677 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 RNU6-581P-201ENST00000516214 105 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 LINC00557-201ENST00000563184 1279 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.75□□□□□ -2.29
HIST1H1AQ02539 AC004492.1-201ENST00000607036 742 ntBASIC0.75□□□□□ -2.29
HIST1H1AQ02539 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RPL21P90-201ENST00000415692 466 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AC010153.1-201ENST00000432862 727 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AC008628.1-201ENST00000508663 265 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RNA5SP458-201ENST00000516188 119 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RNVU1-2-201ENST00000516326 135 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RNU5B-3P-201ENST00000516601 115 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RNU6-678P-201ENST00000516832 109 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.74□□□□□ -2.29
HIST1H1AQ02539 RPL30P11-203ENST00000598995 310 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 AL132822.1-201ENST00000617063 513 ntBASIC0.74□□□□□ -2.29
HIST1H1AQ02539 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 ICE2P2-201ENST00000483823 2787 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 NACAP2-201ENST00000318548 624 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 RNU4-38P-201ENST00000364472 129 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 Y_RNA.327-201ENST00000365201 102 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 RNU2-32P-201ENST00000411193 191 ntBASIC0.73□□□□□ -2.29
HIST1H1AQ02539 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.73□□□□□ -2.29
HIST1H1AQ02539 AC021382.1-201ENST00000483523 359 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms