Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 RPS15AP5-201ENST00000436276 388 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 RPL23AP35-201ENST00000451906 501 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 RNA5SP57-201ENST00000459463 123 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.65□□□□□ -2.3
SCN7AQ01118 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.65□□□□□ -2.3
SCN7AQ01118 SNORA31.6-201ENST00000516241 130 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 AP003355.1-201ENST00000518956 587 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 CR383656.7-201ENST00000548164 174 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 AL391813.1-201ENST00000603098 260 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 AC021851.1-201ENST00000608537 1082 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 AC009233.1-201ENST00000616477 371 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 AC073544.1-201ENST00000600110 1595 ntBASIC0.65□□□□□ -2.3
SCN7AQ01118 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.65□□□□□ -2.31
SCN7AQ01118 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
SCN7AQ01118 MIR649-201ENST00000384843 97 ntBASIC0.65□□□□□ -2.31
SCN7AQ01118 RNU11-3P-201ENST00000391111 133 ntBASIC0.65□□□□□ -2.31
SCN7AQ01118 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN7AQ01118 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
SCN7AQ01118 RPS20P10-201ENST00000451209 253 ntBASIC0.65□□□□□ -2.31
SCN7AQ01118 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN7AQ01118 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC0.65□□□□□ -2.31
SCN7AQ01118 AC233702.2-202ENST00000562547 291 ntBASIC0.65□□□□□ -2.31
SCN7AQ01118 MTND4P12-201ENST00000498999 1377 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
SCN7AQ01118 RNU5E-1-201ENST00000362477 120 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 SNORD1A-201ENST00000364968 72 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.64□□□□□ -2.31
SCN7AQ01118 HMGB1P17-201ENST00000403495 628 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 USP9YP33-201ENST00000412220 421 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN7AQ01118 NDUFB4P7-201ENST00000423198 363 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 USP9YP35-201ENST00000435696 412 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 NIFKP6-201ENST00000598115 845 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.64□□□□□ -2.31
SCN7AQ01118 SNRPGP17-201ENST00000603780 214 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 SUMO2P14-201ENST00000604488 293 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AL589743.7-201ENST00000612637 233 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AL078604.3-201ENST00000615580 211 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 AC040168.1-201ENST00000623594 991 ntBASIC0.64□□□□□ -2.31
SCN7AQ01118 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
SCN7AQ01118 MIR515-2-201ENST00000384883 83 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 MIR515-1-201ENST00000384884 83 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 AC013410.2-201ENST00000422627 201 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN7AQ01118 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.63□□□□□ -2.31
SCN7AQ01118 RPL22P13-201ENST00000493291 347 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.63□□□□□ -2.31
SCN7AQ01118 SNORA62.5-201ENST00000516634 120 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 AC138473.1-201ENST00000605717 526 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 AL121890.5-201ENST00000620848 304 ntBASIC0.63□□□□□ -2.31
SCN7AQ01118 MIR424-201ENST00000362227 98 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AL035410.1-201ENST00000427409 427 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC098934.3-201ENST00000430450 190 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 SNRPEP7-201ENST00000438350 220 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN7AQ01118 MTCO1P53-201ENST00000441633 699 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 FCF1P6-201ENST00000456841 595 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 CYP2C59P-201ENST00000457790 269 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 BOLA3P3-201ENST00000505182 232 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 RNU6-322P-201ENST00000516010 103 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.62□□□□□ -2.31
SCN7AQ01118 AC124947.2-202ENST00000552735 133 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.62□□□□□ -2.31
SCN7AQ01118 U6.107-201ENST00000637108 79 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 OR5T3-201ENST00000303059 1023 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 RNU1-36P-201ENST00000365130 165 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 SNORD51-201ENST00000384320 80 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 RNU6-1222P-201ENST00000384615 107 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 MIR29C-201ENST00000385231 88 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN7AQ01118 TOMM22P2-201ENST00000430735 237 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AL512844.2-201ENST00000433990 593 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN7AQ01118 RPL30P7-201ENST00000479312 323 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC022483.1-201ENST00000514020 567 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 RNU6-491P-201ENST00000516099 110 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 ADAM3B-201ENST00000569937 840 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC087045.1-201ENST00000605856 382 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC022202.1-201ENST00000613515 211 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AL391597.1-201ENST00000618707 694 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC067863.3-201ENST00000624172 122 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 AC087821.2-201ENST00000637086 450 ntBASIC0.62□□□□□ -2.31
SCN7AQ01118 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.62□□□□□ -2.31
SCN7AQ01118 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN7AQ01118 MIR1283-2-201ENST00000408621 87 ntBASIC0.61□□□□□ -2.31
SCN7AQ01118 SNORD116-28-201ENST00000516123 91 ntBASIC0.61□□□□□ -2.31
SCN7AQ01118 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.61□□□□□ -2.31
SCN7AQ01118 CYP2C61P-201ENST00000604072 290 ntBASIC0.61□□□□□ -2.31
SCN7AQ01118 AC012676.2-201ENST00000619258 186 ntBASIC0.61□□□□□ -2.31
SCN7AQ01118 AL512506.2-201ENST00000624472 458 ntBASIC0.61□□□□□ -2.31
SCN7AQ01118 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SCN7AQ01118 AC100821.1-201ENST00000523153 2479 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SCN7AQ01118 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SCN7AQ01118 RNU6-748P-201ENST00000384648 107 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 RNA5SP63-201ENST00000391225 112 ntBASIC0.6□□□□□ -2.31
SCN7AQ01118 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms