Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-754P-201ENST00000391166 107 ntBASIC2.56□□□□□ -2
LMO4P61968 AL109755.1-201ENST00000401791 649 ntBASIC2.56□□□□□ -2
LMO4P61968 AL592114.1-201ENST00000403842 483 ntBASIC2.56□□□□□ -2
LMO4P61968 MIR548F5-201ENST00000408421 86 ntBASIC2.56□□□□□ -2
LMO4P61968 VN1R36P-201ENST00000414936 291 ntBASIC2.56□□□□□ -2
LMO4P61968 ARL5AP1-201ENST00000418991 388 ntBASIC2.56□□□□□ -2
LMO4P61968 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 MTCO2P27-201ENST00000420740 428 ntBASIC2.56□□□□□ -2
LMO4P61968 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 AC092573.2-201ENST00000434546 243 ntBASIC2.56□□□□□ -2
LMO4P61968 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.56□□□□□ -2
LMO4P61968 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.56□□□□□ -2
LMO4P61968 Y_RNA.635-201ENST00000459041 101 ntBASIC2.56□□□□□ -2
LMO4P61968 RPL30P5-201ENST00000494923 336 ntBASIC2.56□□□□□ -2
LMO4P61968 Y_RNA.654-201ENST00000497848 106 ntBASIC2.56□□□□□ -2
LMO4P61968 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC098591.2-201ENST00000510152 315 ntBASIC2.56□□□□□ -2
LMO4P61968 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC108078.2-201ENST00000510750 236 ntBASIC2.56□□□□□ -2
LMO4P61968 AC005741.1-201ENST00000511094 432 ntBASIC2.56□□□□□ -2
LMO4P61968 SNORA31.1-201ENST00000515993 133 ntBASIC2.56□□□□□ -2
LMO4P61968 SNORA31.5-201ENST00000516190 133 ntBASIC2.56□□□□□ -2
LMO4P61968 RNU6-1088P-201ENST00000516850 104 ntBASIC2.56□□□□□ -2
LMO4P61968 Y_RNA.718-201ENST00000517110 102 ntBASIC2.56□□□□□ -2
LMO4P61968 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 MTND4P7-201ENST00000523876 130 ntBASIC2.56□□□□□ -2
LMO4P61968 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
LMO4P61968 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 ELOCP31-201ENST00000540463 467 ntBASIC2.56□□□□□ -2
LMO4P61968 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.56□□□□□ -2
LMO4P61968 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.56□□□□□ -2
LMO4P61968 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.56□□□□□ -2
LMO4P61968 APOOP1-201ENST00000604695 592 ntBASIC2.56□□□□□ -2
LMO4P61968 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
LMO4P61968 AC040896.1-201ENST00000613819 479 ntBASIC2.56□□□□□ -2
LMO4P61968 uc_338.11-201ENST00000619132 160 ntBASIC2.56□□□□□ -2
LMO4P61968 AC073476.4-201ENST00000628409 72 ntBASIC2.56□□□□□ -2
LMO4P61968 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC2.56□□□□□ -2
LMO4P61968 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LMO4P61968 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMO4P61968 API5P2-201ENST00000397055 1498 ntBASIC2.56□□□□□ -2
LMO4P61968 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.56□□□□□ -2
LMO4P61968 TPTE2P4-201ENST00000258589 1605 ntBASIC2.56□□□□□ -2
LMO4P61968 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.56□□□□□ -2
LMO4P61968 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.56□□□□□ -2
LMO4P61968 OR4G2P-202ENST00000641004 1759 ntBASIC2.56□□□□□ -2
LMO4P61968 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.55□□□□□ -2
LMO4P61968 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC2.55□□□□□ -2
LMO4P61968 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU6-1252P-201ENST00000363054 104 ntBASIC2.55□□□□□ -2
LMO4P61968 Y_RNA.128-201ENST00000363391 112 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU6-960P-201ENST00000364056 120 ntBASIC2.55□□□□□ -2
LMO4P61968 SNORA63C-201ENST00000364578 129 ntBASIC2.55□□□□□ -2
LMO4P61968 SNORA23-201ENST00000365128 182 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU6-738P-201ENST00000384531 106 ntBASIC2.55□□□□□ -2
LMO4P61968 SNORD67-201ENST00000390833 111 ntBASIC2.55□□□□□ -2
LMO4P61968 MIR548K-201ENST00000408406 116 ntBASIC2.55□□□□□ -2
LMO4P61968 UBE2FP1-201ENST00000416536 447 ntBASIC2.55□□□□□ -2
LMO4P61968 RPL7P46-201ENST00000425129 740 ntBASIC2.55□□□□□ -2
LMO4P61968 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.55□□□□□ -2
LMO4P61968 GPM6BP2-201ENST00000432046 144 ntBASIC2.55□□□□□ -2
LMO4P61968 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.55□□□□□ -2
LMO4P61968 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
LMO4P61968 GPM6BP1-201ENST00000446387 144 ntBASIC2.55□□□□□ -2
LMO4P61968 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.55□□□□□ -2
LMO4P61968 GAPDHP27-201ENST00000447427 1020 ntBASIC2.55□□□□□ -2
LMO4P61968 SNORD97-201ENST00000459187 142 ntBASIC2.55□□□□□ -2
LMO4P61968 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.55□□□□□ -2
LMO4P61968 AC004801.2-202ENST00000463559 283 ntBASIC2.55□□□□□ -2
LMO4P61968 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.55□□□□□ -2
LMO4P61968 AC104806.1-201ENST00000508720 308 ntBASIC2.55□□□□□ -2
LMO4P61968 AC006445.2-201ENST00000510061 472 ntBASIC2.55□□□□□ -2
LMO4P61968 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.55□□□□□ -2
LMO4P61968 SCARNA15.2-201ENST00000516409 127 ntBASIC2.55□□□□□ -2
LMO4P61968 Y_RNA.682-201ENST00000516457 100 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU6-1256P-201ENST00000516539 103 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.55□□□□□ -2
LMO4P61968 RNU6-1231P-201ENST00000517185 103 ntBASIC2.55□□□□□ -2
LMO4P61968 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.55□□□□□ -2
LMO4P61968 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.55□□□□□ -2
LMO4P61968 AL137161.1-201ENST00000532231 390 ntBASIC2.55□□□□□ -2
LMO4P61968 AP000763.2-201ENST00000540641 163 ntBASIC2.55□□□□□ -2
LMO4P61968 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.55□□□□□ -2
LMO4P61968 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC2.55□□□□□ -2
LMO4P61968 AL355836.1-201ENST00000555951 870 ntBASIC2.55□□□□□ -2
LMO4P61968 MIR5047-201ENST00000579212 100 ntBASIC2.55□□□□□ -2
LMO4P61968 AL670379.11-201ENST00000604059 253 ntBASIC2.55□□□□□ -2
LMO4P61968 AL670379.10-201ENST00000604330 253 ntBASIC2.55□□□□□ -2
LMO4P61968 AL670379.12-201ENST00000605291 253 ntBASIC2.55□□□□□ -2
LMO4P61968 AL670379.9-201ENST00000605428 253 ntBASIC2.55□□□□□ -2
LMO4P61968 AC116312.1-201ENST00000606841 314 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms