Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1□□□□□ -2.25
VBP1P61758 AC117532.1-201ENST00000514638 323 ntBASIC1□□□□□ -2.25
VBP1P61758 RNU6-1102P-201ENST00000516149 96 ntBASIC1□□□□□ -2.25
VBP1P61758 RNU6-1261P-201ENST00000517194 104 ntBASIC1□□□□□ -2.25
VBP1P61758 AP001189.2-201ENST00000527320 189 ntBASIC1□□□□□ -2.25
VBP1P61758 AC022616.8-201ENST00000533569 253 ntBASIC1□□□□□ -2.25
VBP1P61758 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1□□□□□ -2.25
VBP1P61758 MIR4789-201ENST00000577469 82 ntBASIC1□□□□□ -2.25
VBP1P61758 SNORA77B-201ENST00000578179 125 ntBASIC1□□□□□ -2.25
VBP1P61758 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
VBP1P61758 AC011494.1-201ENST00000596454 237 ntBASIC1□□□□□ -2.25
VBP1P61758 AC073410.2-201ENST00000603240 332 ntBASIC1□□□□□ -2.25
VBP1P61758 ICE2P2-201ENST00000483823 2787 ntBASIC1□□□□□ -2.25
VBP1P61758 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
VBP1P61758 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
VBP1P61758 RNA5SP327-201ENST00000362494 101 ntBASIC0.99□□□□□ -2.25
VBP1P61758 SNORD114-19-201ENST00000363072 75 ntBASIC0.99□□□□□ -2.25
VBP1P61758 Y_RNA.99-201ENST00000363138 105 ntBASIC0.99□□□□□ -2.25
VBP1P61758 RNU6-343P-201ENST00000364709 104 ntBASIC0.99□□□□□ -2.25
VBP1P61758 SNORD1A-201ENST00000364968 72 ntBASIC0.99□□□□□ -2.25
VBP1P61758 RNA5SP190-201ENST00000365222 118 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AC027644.1-201ENST00000419595 298 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.99□□□□□ -2.25
VBP1P61758 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.99□□□□□ -2.25
VBP1P61758 MTATP6P30-201ENST00000443540 664 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.99□□□□□ -2.25
VBP1P61758 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.99□□□□□ -2.25
VBP1P61758 AC023194.1-201ENST00000493084 308 ntBASIC0.99□□□□□ -2.25
VBP1P61758 RPS29P21-201ENST00000496272 170 ntBASIC0.99□□□□□ -2.25
VBP1P61758 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
VBP1P61758 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.99□□□□□ -2.25
VBP1P61758 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.99□□□□□ -2.25
VBP1P61758 AL583856.2-201ENST00000606298 543 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AC004492.1-201ENST00000607036 742 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AC098614.4-201ENST00000607601 462 ntBASIC0.99□□□□□ -2.25
VBP1P61758 MIR6798-201ENST00000612887 67 ntBASIC0.99□□□□□ -2.25
VBP1P61758 AC233981.2-201ENST00000611524 1614 ntBASIC0.99□□□□□ -2.25
VBP1P61758 ZNF209P-201ENST00000593450 2304 ntBASIC0.99□□□□□ -2.25
VBP1P61758 SNORA29-201ENST00000384183 140 ntBASIC0.98□□□□□ -2.25
VBP1P61758 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
VBP1P61758 UBE2V1P2-201ENST00000397758 440 ntBASIC0.98□□□□□ -2.25
VBP1P61758 SNORA11.1-201ENST00000408133 129 ntBASIC0.98□□□□□ -2.25
VBP1P61758 PIGPP2-201ENST00000411569 458 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.98□□□□□ -2.25
VBP1P61758 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.98□□□□□ -2.25
VBP1P61758 TRIM60P13-201ENST00000432350 1283 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.98□□□□□ -2.25
VBP1P61758 MTCO3P45-201ENST00000443036 613 ntBASIC0.98□□□□□ -2.25
VBP1P61758 RPL23AP35-201ENST00000451906 501 ntBASIC0.98□□□□□ -2.25
VBP1P61758 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.98□□□□□ -2.25
VBP1P61758 AC114981.1-201ENST00000503897 678 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC079140.2-201ENST00000506193 142 ntBASIC0.98□□□□□ -2.25
VBP1P61758 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
VBP1P61758 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.98□□□□□ -2.25
VBP1P61758 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.98□□□□□ -2.25
VBP1P61758 RNU6-295P-201ENST00000516901 104 ntBASIC0.98□□□□□ -2.25
VBP1P61758 RNU1-92P-201ENST00000517017 135 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.98□□□□□ -2.25
VBP1P61758 TRAV32-201ENST00000553993 340 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC090330.1-201ENST00000588646 764 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC004908.3-201ENST00000610248 625 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC008759.3-201ENST00000613300 508 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC253576.2-201ENST00000618815 580 ntBASIC0.98□□□□□ -2.25
VBP1P61758 AC013470.4-201ENST00000619978 986 ntBASIC0.98□□□□□ -2.25
VBP1P61758 U6.99-201ENST00000637524 83 ntBASIC0.98□□□□□ -2.25
VBP1P61758 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.98□□□□□ -2.25
VBP1P61758 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.98□□□□□ -2.25
VBP1P61758 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
VBP1P61758 AL391516.1-201ENST00000554380 2449 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VBP1P61758 RNU6-23P-201ENST00000363283 107 ntBASIC0.97□□□□□ -2.25
VBP1P61758 RNU1-22P-201ENST00000363334 158 ntBASIC0.97□□□□□ -2.25
VBP1P61758 RNU6-792P-201ENST00000363490 107 ntBASIC0.97□□□□□ -2.25
VBP1P61758 RNU6-650P-201ENST00000365658 111 ntBASIC0.97□□□□□ -2.25
VBP1P61758 SNORA67.5-201ENST00000391036 107 ntBASIC0.97□□□□□ -2.25
VBP1P61758 SNORD13-201ENST00000459299 104 ntBASIC0.97□□□□□ -2.25
VBP1P61758 HMGN1P13-201ENST00000505795 138 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.97□□□□□ -2.25
VBP1P61758 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.97□□□□□ -2.25
VBP1P61758 AC023632.1-201ENST00000518463 375 ntBASIC0.97□□□□□ -2.25
VBP1P61758 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AC044913.1-201ENST00000557200 430 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AC103987.3-201ENST00000582071 292 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.97□□□□□ -2.25
VBP1P61758 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.97□□□□□ -2.25
VBP1P61758 AP002906.1-201ENST00000603405 233 ntBASIC0.97□□□□□ -2.25
VBP1P61758 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.97□□□□□ -2.25
VBP1P61758 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VBP1P61758 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.96□□□□□ -2.26
VBP1P61758 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.96□□□□□ -2.26
VBP1P61758 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VBP1P61758 MIR449A-201ENST00000362113 91 ntBASIC0.96□□□□□ -2.26
VBP1P61758 RNU6-97P-201ENST00000363387 104 ntBASIC0.96□□□□□ -2.26
VBP1P61758 U6.112-201ENST00000384129 70 ntBASIC0.96□□□□□ -2.26
VBP1P61758 Y_RNA.510-201ENST00000384511 114 ntBASIC0.96□□□□□ -2.26
VBP1P61758 RNU6-1274P-201ENST00000384557 107 ntBASIC0.96□□□□□ -2.26
VBP1P61758 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.96□□□□□ -2.26
VBP1P61758 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms