Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-64P-201ENST00000517119 105 ntBASIC1.43□□□□□ -2.18
ACTBP60709 AC009902.1-201ENST00000519351 183 ntBASIC1.43□□□□□ -2.18
ACTBP60709 AP006587.4-201ENST00000526053 529 ntBASIC1.43□□□□□ -2.18
ACTBP60709 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.43□□□□□ -2.18
ACTBP60709 AC084851.1-201ENST00000529105 249 ntBASIC1.43□□□□□ -2.18
ACTBP60709 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.43□□□□□ -2.18
ACTBP60709 RPS3AP4-201ENST00000555161 764 ntBASIC1.43□□□□□ -2.18
ACTBP60709 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.43□□□□□ -2.18
ACTBP60709 AC087045.1-201ENST00000605856 382 ntBASIC1.43□□□□□ -2.18
ACTBP60709 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.43□□□□□ -2.18
ACTBP60709 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.43□□□□□ -2.18
ACTBP60709 AC099654.9-201ENST00000637055 678 ntBASIC1.43□□□□□ -2.18
ACTBP60709 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
ACTBP60709 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
ACTBP60709 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
ACTBP60709 AL356292.1-201ENST00000283110 373 ntBASIC1.42□□□□□ -2.18
ACTBP60709 Y_RNA.472-201ENST00000384322 102 ntBASIC1.42□□□□□ -2.18
ACTBP60709 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
ACTBP60709 AL359704.1-201ENST00000411586 781 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC078974.1-201ENST00000411597 223 ntBASIC1.42□□□□□ -2.18
ACTBP60709 RPL23AP39-201ENST00000415533 405 ntBASIC1.42□□□□□ -2.18
ACTBP60709 UBE2V1P4-201ENST00000425374 344 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.42□□□□□ -2.18
ACTBP60709 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.42□□□□□ -2.18
ACTBP60709 AL591806.2-201ENST00000433122 173 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AL645568.3-201ENST00000433683 316 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.42□□□□□ -2.18
ACTBP60709 AC117522.2-201ENST00000510049 657 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.42□□□□□ -2.18
ACTBP60709 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.42□□□□□ -2.18
ACTBP60709 RNU5B-3P-201ENST00000516601 115 ntBASIC1.42□□□□□ -2.18
ACTBP60709 RNU6-678P-201ENST00000516832 109 ntBASIC1.42□□□□□ -2.18
ACTBP60709 RNU6-295P-201ENST00000516901 104 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.42□□□□□ -2.18
ACTBP60709 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.42□□□□□ -2.18
ACTBP60709 AL606834.3-201ENST00000602615 496 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AL358072.1-201ENST00000604156 575 ntBASIC1.42□□□□□ -2.18
ACTBP60709 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
ACTBP60709 AC131235.4-201ENST00000609288 620 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC092574.1-201ENST00000609771 420 ntBASIC1.42□□□□□ -2.18
ACTBP60709 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.42□□□□□ -2.18
ACTBP60709 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
ACTBP60709 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.41□□□□□ -2.18
ACTBP60709 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.41□□□□□ -2.18
ACTBP60709 AL591034.2-201ENST00000402839 359 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.41□□□□□ -2.18
ACTBP60709 RPL7P54-201ENST00000438336 674 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.41□□□□□ -2.18
ACTBP60709 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.41□□□□□ -2.18
ACTBP60709 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.41□□□□□ -2.18
ACTBP60709 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC1.41□□□□□ -2.18
ACTBP60709 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.41□□□□□ -2.18
ACTBP60709 AC104564.1-201ENST00000493028 407 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC023194.1-201ENST00000493084 308 ntBASIC1.41□□□□□ -2.18
ACTBP60709 RPL23AP63-201ENST00000498752 471 ntBASIC1.41□□□□□ -2.18
ACTBP60709 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
ACTBP60709 TPT1P8-201ENST00000510120 555 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.41□□□□□ -2.18
ACTBP60709 AC011494.1-201ENST00000596454 237 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AL596327.1-201ENST00000603629 213 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC021646.1-201ENST00000605469 484 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AC034229.4-201ENST00000607861 441 ntBASIC1.41□□□□□ -2.18
ACTBP60709 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.41□□□□□ -2.18
ACTBP60709 uc_338.5-201ENST00000611839 155 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AP003476.1-201ENST00000623984 516 ntBASIC1.41□□□□□ -2.18
ACTBP60709 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.41□□□□□ -2.18
ACTBP60709 AP000776.1-201ENST00000530032 1663 ntBASIC1.41□□□□□ -2.18
ACTBP60709 TEX21P-201ENST00000447107 1476 ntBASIC1.4□□□□□ -2.19
ACTBP60709 RNU1-23P-201ENST00000363361 144 ntBASIC1.4□□□□□ -2.19
ACTBP60709 RNU6-413P-201ENST00000384115 107 ntBASIC1.4□□□□□ -2.19
ACTBP60709 U8.13-201ENST00000390842 128 ntBASIC1.4□□□□□ -2.19
ACTBP60709 ERHP2-201ENST00000402323 299 ntBASIC1.4□□□□□ -2.19
ACTBP60709 USP9YP33-201ENST00000412220 421 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC009310.1-201ENST00000414414 451 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTBP60709 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTBP60709 AL445669.1-201ENST00000426743 755 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTBP60709 RPS25P9-201ENST00000435591 252 ntBASIC1.4□□□□□ -2.19
ACTBP60709 USP9YP35-201ENST00000435696 412 ntBASIC1.4□□□□□ -2.19
ACTBP60709 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.4□□□□□ -2.19
ACTBP60709 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.4□□□□□ -2.19
ACTBP60709 AC007327.1-201ENST00000447461 264 ntBASIC1.4□□□□□ -2.19
ACTBP60709 HSPE1P24-201ENST00000450782 238 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC112771.1-201ENST00000463581 102 ntBASIC1.4□□□□□ -2.19
ACTBP60709 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.4□□□□□ -2.19
ACTBP60709 AC109445.1-201ENST00000512356 383 ntBASIC1.4□□□□□ -2.19
ACTBP60709 RNA5SP216-201ENST00000516111 123 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC009712.1-201ENST00000564938 316 ntBASIC1.4□□□□□ -2.19
ACTBP60709 MIR4769-201ENST00000584126 77 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC016925.2-201ENST00000605108 242 ntBASIC1.4□□□□□ -2.19
ACTBP60709 NDUFA8P1-201ENST00000605525 367 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC025754.2-201ENST00000606491 432 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC068944.2-201ENST00000610373 403 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC084768.2-201ENST00000622736 221 ntBASIC1.4□□□□□ -2.19
ACTBP60709 AC241585.2-209ENST00000638217 143 ntBASIC1.4□□□□□ -2.19
ACTBP60709 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
ACTBP60709 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms