Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-415P-201ENST00000516252 97 ntBASIC1.88□□□□□ -2.11
VSX2P58304 RNU6-572P-201ENST00000516724 80 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC022616.6-201ENST00000520479 119 ntBASIC1.88□□□□□ -2.11
VSX2P58304 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.88□□□□□ -2.11
VSX2P58304 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.88□□□□□ -2.11
VSX2P58304 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.88□□□□□ -2.11
VSX2P58304 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.88□□□□□ -2.11
VSX2P58304 AL355598.1-201ENST00000604169 202 ntBASIC1.88□□□□□ -2.11
VSX2P58304 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.88□□□□□ -2.11
VSX2P58304 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
VSX2P58304 uc_338.20-201ENST00000621563 178 ntBASIC1.88□□□□□ -2.11
VSX2P58304 YWHAEP7-203ENST00000622054 312 ntBASIC1.88□□□□□ -2.11
VSX2P58304 AC244517.12-201ENST00000623581 663 ntBASIC1.88□□□□□ -2.11
VSX2P58304 MTND5P42-201ENST00000637720 498 ntBASIC1.88□□□□□ -2.11
VSX2P58304 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.88□□□□□ -2.11
VSX2P58304 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.87□□□□□ -2.11
VSX2P58304 AL445523.1-201ENST00000451184 1362 ntBASIC1.87□□□□□ -2.11
VSX2P58304 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.87□□□□□ -2.11
VSX2P58304 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VSX2P58304 AC002543.1-201ENST00000299783 1954 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RNU4-28P-201ENST00000364739 141 ntBASIC1.87□□□□□ -2.11
VSX2P58304 MIR764-201ENST00000390811 85 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
VSX2P58304 MTCYBP36-201ENST00000404146 440 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RPS24P7-201ENST00000416921 246 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RPL22P18-201ENST00000417197 377 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC098592.1-201ENST00000419352 333 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.87□□□□□ -2.11
VSX2P58304 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.87□□□□□ -2.11
VSX2P58304 AL139824.2-201ENST00000458731 1095 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RPL37P6-201ENST00000460682 294 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RPL23AP42-201ENST00000471152 471 ntBASIC1.87□□□□□ -2.11
VSX2P58304 RPS3AP22-201ENST00000488297 769 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC092104.1-201ENST00000497346 1441 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC108210.2-201ENST00000503681 201 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.87□□□□□ -2.11
VSX2P58304 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.87□□□□□ -2.11
VSX2P58304 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.87□□□□□ -2.11
VSX2P58304 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AP003181.2-201ENST00000528941 181 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.87□□□□□ -2.11
VSX2P58304 ELOCP32-201ENST00000548625 324 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.87□□□□□ -2.11
VSX2P58304 AC091489.2-201ENST00000566263 604 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC008751.2-201ENST00000597885 980 ntBASIC1.87□□□□□ -2.11
VSX2P58304 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC105129.3-201ENST00000605455 485 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC022893.3-201ENST00000607665 437 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AC009318.2-201ENST00000610917 651 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AL365204.3-201ENST00000612448 685 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AP001486.3-201ENST00000615334 372 ntBASIC1.87□□□□□ -2.11
VSX2P58304 MIR6134-201ENST00000617606 109 ntBASIC1.87□□□□□ -2.11
VSX2P58304 AL512643.1-201ENST00000635735 524 ntBASIC1.87□□□□□ -2.11
VSX2P58304 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VSX2P58304 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
VSX2P58304 SNORA75B-201ENST00000384053 137 ntBASIC1.86□□□□□ -2.11
VSX2P58304 MIR518D-201ENST00000385014 87 ntBASIC1.86□□□□□ -2.11
VSX2P58304 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
VSX2P58304 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.86□□□□□ -2.11
VSX2P58304 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC011233.1-201ENST00000422812 283 ntBASIC1.86□□□□□ -2.11
VSX2P58304 PTGES3P4-201ENST00000426243 356 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.86□□□□□ -2.11
VSX2P58304 AC093899.1-201ENST00000457984 376 ntBASIC1.86□□□□□ -2.11
VSX2P58304 MTAPP1-201ENST00000489154 819 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.86□□□□□ -2.11
VSX2P58304 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 AC116337.1-201ENST00000509680 687 ntBASIC1.86□□□□□ -2.11
VSX2P58304 SMURF2P1-201ENST00000514992 481 ntBASIC1.86□□□□□ -2.11
VSX2P58304 Y_RNA.689-201ENST00000516589 107 ntBASIC1.86□□□□□ -2.11
VSX2P58304 RNU7-193P-201ENST00000516723 65 ntBASIC1.86□□□□□ -2.11
VSX2P58304 RNU6-914P-201ENST00000516749 109 ntBASIC1.86□□□□□ -2.11
VSX2P58304 RNU6-678P-201ENST00000516832 109 ntBASIC1.86□□□□□ -2.11
VSX2P58304 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
VSX2P58304 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 MTND4LP18-201ENST00000526864 291 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC135279.1-201ENST00000543493 504 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VSX2P58304 LINC00933-203ENST00000559812 219 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 AC012213.3-201ENST00000577199 777 ntBASIC1.86□□□□□ -2.11
VSX2P58304 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.86□□□□□ -2.11
VSX2P58304 AC025754.2-201ENST00000606491 432 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC034229.4-201ENST00000607861 441 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC010678.1-201ENST00000614118 713 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC009233.1-201ENST00000616477 371 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AC024581.2-201ENST00000619986 252 ntBASIC1.86□□□□□ -2.11
VSX2P58304 SDR42E1P4-201ENST00000620894 481 ntBASIC1.86□□□□□ -2.11
VSX2P58304 AP002791.1-201ENST00000623291 381 ntBASIC1.86□□□□□ -2.11
VSX2P58304 CDC27P3-201ENST00000635418 1910 ntBASIC1.85□□□□□ -2.11
VSX2P58304 AL356292.1-201ENST00000283110 373 ntBASIC1.85□□□□□ -2.11
VSX2P58304 RNY4P24-201ENST00000362735 96 ntBASIC1.85□□□□□ -2.11
VSX2P58304 RNU1-72P-201ENST00000362976 153 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms