Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC099654.14-201ENST00000638599 341 ntBASIC2.85□□□□□ -1.95
CLDN20P56880 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN20P56880 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CLDN20P56880 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN20P56880 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.84□□□□□ -1.95
CLDN20P56880 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN20P56880 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
CLDN20P56880 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN20P56880 AC233263.6-201ENST00000631132 1963 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 RNU6-522P-201ENST00000364497 107 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 RNU6-198P-201ENST00000384258 104 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 RNU6-166P-201ENST00000384371 107 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 RNU4-26P-201ENST00000410270 107 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CLDN20P56880 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 AL353729.1-201ENST00000425044 720 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC007560.1-201ENST00000426912 237 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 HMGB1P9-201ENST00000429856 646 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 AL078601.1-201ENST00000444542 271 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AL671855.1-201ENST00000446875 1203 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 RPL26P9-201ENST00000457466 433 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 DYNLL1P5-201ENST00000467158 270 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC006445.1-201ENST00000491925 405 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC079140.5-201ENST00000507882 310 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 MTND3P25-201ENST00000509243 135 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 RNU6-1038P-201ENST00000516516 104 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 RNU6-711P-201ENST00000517255 106 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC090115.3-201ENST00000553218 849 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.84□□□□□ -1.95
CLDN20P56880 LRRC37A5P-203ENST00000580181 585 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC092807.2-201ENST00000609367 243 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 Z82243.1-201ENST00000609432 473 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 DUXAP9-208ENST00000622815 614 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 AP003122.6-201ENST00000623831 495 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 U6.99-201ENST00000637524 83 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.84□□□□□ -1.95
CLDN20P56880 AC010680.1-201ENST00000590024 3590 ntBASIC2.84□□□□□ -1.95
CLDN20P56880 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.84□□□□□ -1.96
CLDN20P56880 CASC19-280ENST00000642102 1351 ntBASIC2.84□□□□□ -1.96
CLDN20P56880 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
CLDN20P56880 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN20P56880 Y_RNA.378-201ENST00000365652 113 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 SNORA7.4-201ENST00000384249 137 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 Y_RNA.480-201ENST00000384364 102 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RNU6-658P-201ENST00000384606 106 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RNU1-101P-201ENST00000391171 127 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RPS4XP7-201ENST00000406274 780 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AL356776.1-201ENST00000406574 447 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 Y_RNA.623-201ENST00000411128 95 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RNU6-607P-201ENST00000411283 108 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 POLHP1-201ENST00000411806 470 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 AL714022.1-201ENST00000439897 151 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AL583843.1-201ENST00000456070 346 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AC092798.1-201ENST00000458542 409 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 HIGD1AP13-201ENST00000509878 289 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RNU6-189P-201ENST00000516120 101 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 RNA5SP76-201ENST00000516277 87 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 SNORA74D-201ENST00000516404 141 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN20P56880 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.83□□□□□ -1.96
CLDN20P56880 NACAP3-201ENST00000552100 481 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 MIR4782-201ENST00000577987 79 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 AC092747.3-201ENST00000603769 301 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AL645944.1-201ENST00000603857 493 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 BNIP3P10-201ENST00000605360 577 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
CLDN20P56880 RMST_4.1-201ENST00000616886 107 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AL031601.2-202ENST00000622650 282 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 AC091953.5-201ENST00000622919 233 ntBASIC2.83□□□□□ -1.96
CLDN20P56880 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
CLDN20P56880 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.83□□□□□ -1.96
CLDN20P56880 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CLDN20P56880 SNORD3E-201ENST00000362899 217 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 Y_RNA.88-201ENST00000363029 99 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 U3.12-201ENST00000364498 214 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CLDN20P56880 Y_RNA.390-201ENST00000383932 102 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 MT-TL1-201ENST00000386347 75 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CLDN20P56880 RNA5SP219-201ENST00000390940 113 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 RNU6-876P-201ENST00000391295 104 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 MIR887-201ENST00000401258 79 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 AL031121.1-201ENST00000406553 254 ntBASIC2.82□□□□□ -1.96
CLDN20P56880 RNU2-3P-201ENST00000410144 191 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms