Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RNU2-29P-201ENST00000410423 189 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.18□□□□□ -1.9
HDAC4P56524 AC099548.1-201ENST00000421443 426 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 RPL36AP53-201ENST00000432891 316 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 MTATP6P23-201ENST00000440153 476 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC4P56524 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.18□□□□□ -1.9
HDAC4P56524 RNU6-358P-201ENST00000516564 75 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 RNU6-914P-201ENST00000516749 109 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC4P56524 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC4P56524 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC4P56524 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.18□□□□□ -1.9
HDAC4P56524 AC010525.2-201ENST00000590920 195 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 DUXAP9-208ENST00000622815 614 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 Z99571.1-201ENST00000636677 394 ntBASIC3.18□□□□□ -1.9
HDAC4P56524 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.18□□□□□ -1.9
HDAC4P56524 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HDAC4P56524 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
HDAC4P56524 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HDAC4P56524 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HDAC4P56524 SNORA4.3-201ENST00000365564 137 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
HDAC4P56524 RNU6-877P-201ENST00000383868 107 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RNU6-38P-201ENST00000384085 107 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 Y_RNA.573-201ENST00000384763 105 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 MIR301A-201ENST00000385261 86 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPL21P75-201ENST00000396599 483 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPL21P28-201ENST00000401418 483 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 FGF7P8-201ENST00000402994 292 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AL592114.1-201ENST00000403842 483 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC4P56524 RNU4-46P-201ENST00000410818 138 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RNU6-193P-201ENST00000410977 107 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AC245054.2-201ENST00000415639 319 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AL591704.1-201ENST00000432574 275 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC4P56524 SNRPEP9-201ENST00000436794 238 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 WASF1P1-201ENST00000447560 1131 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 CECR9-201ENST00000453421 199 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RNU6-333P-201ENST00000459117 107 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPL21P39-201ENST00000463605 483 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPL21P93-201ENST00000480465 489 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AC087190.1-201ENST00000484462 480 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPS15AP34-201ENST00000487776 387 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AC093591.1-201ENST00000491435 481 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 RPL21P16-201ENST00000495531 483 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC4P56524 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC4P56524 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC4P56524 AC008885.1-201ENST00000514930 301 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.17□□□□□ -1.9
HDAC4P56524 PSMA2P1-201ENST00000526365 646 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AL118558.2-201ENST00000556294 238 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.17□□□□□ -1.9
HDAC4P56524 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.17□□□□□ -1.9
HDAC4P56524 AC104984.5-201ENST00000586878 94 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC4P56524 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC4P56524 GABRG2-229ENST00000641017 3628 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 MAPK10-266ENST00000641066 6555 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AL353743.1-202ENST00000431724 1695 ntBASIC3.17□□□□□ -1.9
HDAC4P56524 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.17□□□□□ -1.9
HDAC4P56524 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC4P56524 AL365361.1-201ENST00000566942 3481 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC4P56524 FTLP6-201ENST00000355274 422 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 RNU6-116P-201ENST00000384042 109 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 RN7SKP220-201ENST00000410611 288 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 RNA5SP111-201ENST00000411386 101 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.16□□□□□ -1.9
HDAC4P56524 AL160275.3-201ENST00000423876 471 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC104058.1-201ENST00000448028 297 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 MTND3P16-201ENST00000452205 344 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 TRBV1-201ENST00000476502 284 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 MTCYBP18-201ENST00000501056 747 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.16□□□□□ -1.9
HDAC4P56524 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 SNORD60.2-201ENST00000516883 86 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 RNU6-1315P-201ENST00000517187 99 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 EIF4BP1-201ENST00000554881 351 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC4P56524 AC060780.3-201ENST00000589464 80 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AL138889.2-201ENST00000603883 242 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AL670379.4-201ENST00000605279 254 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.16□□□□□ -1.9
HDAC4P56524 FTX_3.1-201ENST00000610451 147 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HDAC4P56524 DISC2.1-201ENST00000612827 205 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC007318.2-201ENST00000620999 243 ntBASIC3.16□□□□□ -1.9
HDAC4P56524 AC099654.14-201ENST00000638599 341 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms